Gene BURPS1710b_A0392 details

Gene Information

• Locus tag: BURPS1710b_A0392
• Symbol: soxG
• ID: 3692667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: -
• Start bp: 549564
• End bp: 550199
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637730646
• Product: sarcosine oxidase gamma subunit
• Protein accession: YP_335551
• Protein GI: 76819378
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4583] Sarcosine oxidase gamma subunit
• TIGRFAM ID: [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGAATG AAACGAGAAA CGAAGCTTCG GTGGCGGCCC ATGCGCAGGG CGGCGCGCGG 
CTCGAGTCGC CGCTCGTCGG CGCGGGCGAC GCGCTGAAGG CATACGACGC GCGCGGCTCG 
AAGCAATTCC GGTTCCGCGA GCGGCCGTTC CTCGATCTCG TGAACGTGCG CGGCGAGCCG 
AACGATCCCG CGTTCGTGCG CGCGTTCGAG CAGGTGGTCG GCTGCCGGCC GCCCGTGAAG 
CCGAACACGG TCGCGCGTGG CGCGGATCAT GACGTGCTGT GGCTCGGCCC CGACGAATGG 
CTCGTGCGCT CGAACGGCGC GGTCGCGGCG GGCGCGCTCG AAGCGAAGCT CGCGCAGGCG 
GTGCAGGGGC TCCATGCGGC GGCCGTCGAC GTCGGCAGCG GCTACACGGT TGTCGAGGTG 
AGCGGCGCGC GCGCGCGCGA CGTGCTCGCG CGCGGCTGCC CGCTCGATCT GCACCCGCGC 
GTGTTCGGCG TCGGGCAGTG CGCGCAGAGC CATTACTTCA AGGCGTCGAT CACGCTCGTG 
CCGACGGGCG ACGATTCATA CGACATCGTC GTGCGTCGCA GCTTCGCCGA TTACTTCTGC 
CGCATCATGC TCGACGCGGC GACGCCGCTC GCCTGA 

 

Protein sequence

MWNETRNEAS VAAHAQGGAR LESPLVGAGD ALKAYDARGS KQFRFRERPF LDLVNVRGEP 
NDPAFVRAFE QVVGCRPPVK PNTVARGADH DVLWLGPDEW LVRSNGAVAA GALEAKLAQA 
VQGLHAAAVD VGSGYTVVEV SGARARDVLA RGCPLDLHPR VFGVGQCAQS HYFKASITLV 
PTGDDSYDIV VRRSFADYFC RIMLDAATPL A