Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0388 |
Symbol | cspD |
ID | 3693582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 547401 |
End bp | 547604 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637730642 |
Product | cold shock transcription regulator protein |
Protein accession | YP_335547 |
Protein GI | 76818479 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCG GTACCGTCAA GTGGTTCAAC GAGACCAAGG GTTTTGGCTT CATCACGCCG GATTCGGGCG GCGACGATCT GTTCGCGCAT TTCTCCGAAA TCCGCAGTGA GGGATACAAG ACGCTGGCCG AGAACCAGAA GGTGAGCTTC GAGACGAAGC GGGGCCCGAA AGGCCTCCAG GCTGCCAACA TCAAGCCGCT GTAA
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Protein sequence | MDTGTVKWFN ETKGFGFITP DSGGDDLFAH FSEIRSEGYK TLAENQKVSF ETKRGPKGLQ AANIKPL
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