Gene BURPS1710b_A0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0379 
Symbol 
ID3692355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp537727 
End bp539163 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content71% 
IMG OID637730633 
Productmajor facilitator family transporter 
Protein accessionYP_335538 
Protein GI76819844 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCCG CTCCCGCCGT CCCGTCGCGC GCCGCACGCG CCAGCGCCGC CGCCCGCCTC 
GAACGATTGC CGTTTTCCGG ATACCACAAG CTCATCTTCG TGATCATCGC GATCGCGTTC
TTCTTCGATT CGGTCGACCT CGGCACGATG ACTTTCGTGC TCGGCTCCAT CAAGCGGGAG
TTCGGCCTGT CGACGGCGAC AGCCGGCCTC GTCGCGAGCG CGAGCTTCTT CGGCATGGTG
CTCGGCGCGG CGGTCGCGGG GCTGCTCGCG GACCGCTTCG GCCGGCGGCC CGTCTTCCAG
TGGAGCATGG TGCTATGGGG CGCGGCGTCG TACCTGTGCT CGACCGCGCA GAGCGTCGAC
GCGCTGATCG TCTATCGCGT GCTGCTCGGC ATCGGCATGG GGATGGAATT TCCGGTCGCG
CAAACGCTGC TGTCCGAGTT CGTTCCCGCC GCGAAGCGCG GCCGGCTGAT CGCGCTGATG
GACGGCTTCT GGCCGCTCGG CTTCATCACC GCCGGCGTCG TGTCGTACTT CGTGCTGCCG
CTGTTCGGCT GGCGCACCGT GTTCGCGCTG CTCGCGCTGC CCGCCGTGTT CGTGCTCGTC
GTGCGCCGGC TCGTGCCGGA ATCGCCGCGC TGGCTCGAGC ATCGCGGCCG GCTCGCCGAG
GCCGGGCGCG TGCTCGCGCA CGTCGAGGCA AAGGTCATGA AGTCCGCGCG CGTGGCGAGC
CTGCCCGCGC CGTCGCGGCT TGCCGAGCCG GCTTGCGCGC AGGGCCGCGG TGCGTTCGGC
GAGATCTGGA GCCCCGCCTA CCGCCGCCGC ACGACGATGG TCTGGCTGCT GTGGTTTTTC
GCGCTGCTCG GTTTCTACGG GCTCACGTCG TGGCTCGGCG CGCTCCTGCA GCAAGCCGGC
TTCGCCGTCA CGCAATCCGT GTTCTATACG GTACTGATCT CGCTCGGCGG CATTCCGGGC
TTCCTGTGCG CGGCGTGGCT CGTCGAGCGC TGGGGCCGCA AGCCGACCTG CATCGCGTCG
CTCGTCGGCG GGGGCGCGAT GGCCTACGTG TACGGCCAGA GCGCGCTGTT CGGCGGCAGC
GTGACGCTGC TCGTCGGCAC CGGGCTCGCG ATGCAGTTCT TCCTGTTCGG GATGTGGGCG
GTGCTCTACA CGTACACGCC GGAGCTCTAC GGCACGGGCG CGCGCGCAAC CGGCTCGGGT
TTCGCGTCGG CGATCGGGCG GGTCGGCTCG CTGATCGGGC CGTACGCGGT CGGCATCGTG
CTGCCCGTAT TCGGACAAGG GGGCGTGTTC ACGCTCGGCG CGCTGTCGTT CGTCGTCGCG
GCACTGGCGG TGGGCGTGCT GGGAATCGAG ACCCAAGGCC TGGCGCTCGA GGCGCTCGCG
TCGACGCATG CCGCCGACGA CGATGCGCGC GATCCCGCGG GCGCGGCGGC GAACTGA
 
Protein sequence
MPAAPAVPSR AARASAAARL ERLPFSGYHK LIFVIIAIAF FFDSVDLGTM TFVLGSIKRE 
FGLSTATAGL VASASFFGMV LGAAVAGLLA DRFGRRPVFQ WSMVLWGAAS YLCSTAQSVD
ALIVYRVLLG IGMGMEFPVA QTLLSEFVPA AKRGRLIALM DGFWPLGFIT AGVVSYFVLP
LFGWRTVFAL LALPAVFVLV VRRLVPESPR WLEHRGRLAE AGRVLAHVEA KVMKSARVAS
LPAPSRLAEP ACAQGRGAFG EIWSPAYRRR TTMVWLLWFF ALLGFYGLTS WLGALLQQAG
FAVTQSVFYT VLISLGGIPG FLCAAWLVER WGRKPTCIAS LVGGGAMAYV YGQSALFGGS
VTLLVGTGLA MQFFLFGMWA VLYTYTPELY GTGARATGSG FASAIGRVGS LIGPYAVGIV
LPVFGQGGVF TLGALSFVVA ALAVGVLGIE TQGLALEALA STHAADDDAR DPAGAAAN