Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0368 |
Symbol | emrA |
ID | 3693753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 519337 |
End bp | 520806 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637730623 |
Product | multidrug resistance protein |
Protein accession | YP_335528 |
Protein GI | 76817503 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.672597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGCC GAGACGACGC ACGCACGAGC GCATCGGGTG AGTGCCGCGA GCGCGAAAAC GTCAACTCCA ACGCCTCCTT CACCGTGTAT ACGAGAGATT CGACCGACAC CGACACCGCC GCCGAGCATC GAAGCGCCCC GCGCCGCGCC GCGGCGGCGC CCGGGCCCGT CCGATCCGCG CCTGCCGGCG CCACCGACAT CACGCACGCC ACCATCTTGA ACGACACCGC CACCGACACT GCGCGCGCGA AGGCGCCCAC CGATCCGGCC GTTTCCGACG GCGCGCCCGC GAGCGGGCAC GGCTTGCCTG CGTCGCCCGA AACCGCCGCG ACGCTTGCCG CGCGCCGGGC CACGCGCCGC CGCCGCTTCG CATGGTTCTT CGGAGTGCTG GCGATCGTCG CGCTGGGCGC GGCGCTCTAC TGGTTCATCG TGGGCCGCTT CAGCGAAGAG ACGGACGATG CGTACGTGGC GGGCAACGTC GTGCAGATCG CCGCGCAGAT CCAGGGGACG GTAACCGACG TGCTGGTGGC CGACACGCAG CAGGTGAAGG CGGGGCAGGC GCTGGTGCGG CTCGACGACG CGGAGGCGGC GGCGGCGTTC GCGCAGGCGC AGGCGCAGCT CGCGCAGGCG GTGCGGCAGG TGGCGAACAC GCGGCTGTCG ATGCAGACGT ACGAGCAGAC GGTGAAGGCG CGCGAGGCGG ACCTGAAGCT CGCGCAGCAG GCGTATCGGG CGCGGGCGGG GGCGTCGGTG GAAGTGGTGG CGCCGGAGGA GCTGGCGCGG GCGAAGTCGT CGCTGGCGAA CGCGCAGGCG GCGCTGGCGG GAGCGCAGGC GCAACGGGAG GCGGCGCGCG CGCTGGGCAG CGAGCGGCCG GTCGGGCAGA ACCCGGCGGT GCAGCAGGCG GCCGCGCAGT TCAAGCTGGC GTACCGGAAC CTGAAGCGCA CGACGATCGT GTCGCCGGTG GACGGGACGG TCGGGCAGCG GTCGGTGCAG ATCGGGCAGC AGGTGGGGCC GGGGGTGCCG CTGATGTCGG TGGTGCAGTT GCGGCAGGTG TGGGTGGAGG CGAACTTCAA GGAAGGGCAG TTGCGGCACA TGCGGGTGGG CCAGCCGGTG CGGCTCGAAT CGGACCTGTA CGGCGCGCGG GTGACGTATC ACGGACGGGT GGAGGGCTTC TCGGCGGGCA CGGGCAGCGC ATTCTCGATG CTGCCGTCGC AGAACGCGGC GGGGAACTGG ATCAAGGTGG TGCAGCGCCT GCCGGTGGTG ATCTCGCTGG AGCCGTCGGA GCTGGCGGCG CACCCGTTGC GGGTGGGGCT GTCGATGCGC GCGACGGTGC AGACGAAGGC GCGCGGCGGG CATCTGCTGG ACGGCGACGC GCCGCTGCCG GCGCAGCGCA CGCGGGTGCA CGAAATGCAC GCGGGCGAGG CGGAGGCGGC GGCCGAGGCG GTGATCCGCG CGAACGACGG TGGGCAGTGA
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Protein sequence | MSGRDDARTS ASGECREREN VNSNASFTVY TRDSTDTDTA AEHRSAPRRA AAAPGPVRSA PAGATDITHA TILNDTATDT ARAKAPTDPA VSDGAPASGH GLPASPETAA TLAARRATRR RRFAWFFGVL AIVALGAALY WFIVGRFSEE TDDAYVAGNV VQIAAQIQGT VTDVLVADTQ QVKAGQALVR LDDAEAAAAF AQAQAQLAQA VRQVANTRLS MQTYEQTVKA READLKLAQQ AYRARAGASV EVVAPEELAR AKSSLANAQA ALAGAQAQRE AARALGSERP VGQNPAVQQA AAQFKLAYRN LKRTTIVSPV DGTVGQRSVQ IGQQVGPGVP LMSVVQLRQV WVEANFKEGQ LRHMRVGQPV RLESDLYGAR VTYHGRVEGF SAGTGSAFSM LPSQNAAGNW IKVVQRLPVV ISLEPSELAA HPLRVGLSMR ATVQTKARGG HLLDGDAPLP AQRTRVHEMH AGEAEAAAEA VIRANDGGQ
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