Gene BURPS1710b_A0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0368 
SymbolemrA 
ID3693753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp519337 
End bp520806 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content73% 
IMG OID637730623 
Productmultidrug resistance protein 
Protein accessionYP_335528 
Protein GI76817503 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR00998] efflux pump membrane protein (multidrug resistance protein A) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.672597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGCC GAGACGACGC ACGCACGAGC GCATCGGGTG AGTGCCGCGA GCGCGAAAAC 
GTCAACTCCA ACGCCTCCTT CACCGTGTAT ACGAGAGATT CGACCGACAC CGACACCGCC
GCCGAGCATC GAAGCGCCCC GCGCCGCGCC GCGGCGGCGC CCGGGCCCGT CCGATCCGCG
CCTGCCGGCG CCACCGACAT CACGCACGCC ACCATCTTGA ACGACACCGC CACCGACACT
GCGCGCGCGA AGGCGCCCAC CGATCCGGCC GTTTCCGACG GCGCGCCCGC GAGCGGGCAC
GGCTTGCCTG CGTCGCCCGA AACCGCCGCG ACGCTTGCCG CGCGCCGGGC CACGCGCCGC
CGCCGCTTCG CATGGTTCTT CGGAGTGCTG GCGATCGTCG CGCTGGGCGC GGCGCTCTAC
TGGTTCATCG TGGGCCGCTT CAGCGAAGAG ACGGACGATG CGTACGTGGC GGGCAACGTC
GTGCAGATCG CCGCGCAGAT CCAGGGGACG GTAACCGACG TGCTGGTGGC CGACACGCAG
CAGGTGAAGG CGGGGCAGGC GCTGGTGCGG CTCGACGACG CGGAGGCGGC GGCGGCGTTC
GCGCAGGCGC AGGCGCAGCT CGCGCAGGCG GTGCGGCAGG TGGCGAACAC GCGGCTGTCG
ATGCAGACGT ACGAGCAGAC GGTGAAGGCG CGCGAGGCGG ACCTGAAGCT CGCGCAGCAG
GCGTATCGGG CGCGGGCGGG GGCGTCGGTG GAAGTGGTGG CGCCGGAGGA GCTGGCGCGG
GCGAAGTCGT CGCTGGCGAA CGCGCAGGCG GCGCTGGCGG GAGCGCAGGC GCAACGGGAG
GCGGCGCGCG CGCTGGGCAG CGAGCGGCCG GTCGGGCAGA ACCCGGCGGT GCAGCAGGCG
GCCGCGCAGT TCAAGCTGGC GTACCGGAAC CTGAAGCGCA CGACGATCGT GTCGCCGGTG
GACGGGACGG TCGGGCAGCG GTCGGTGCAG ATCGGGCAGC AGGTGGGGCC GGGGGTGCCG
CTGATGTCGG TGGTGCAGTT GCGGCAGGTG TGGGTGGAGG CGAACTTCAA GGAAGGGCAG
TTGCGGCACA TGCGGGTGGG CCAGCCGGTG CGGCTCGAAT CGGACCTGTA CGGCGCGCGG
GTGACGTATC ACGGACGGGT GGAGGGCTTC TCGGCGGGCA CGGGCAGCGC ATTCTCGATG
CTGCCGTCGC AGAACGCGGC GGGGAACTGG ATCAAGGTGG TGCAGCGCCT GCCGGTGGTG
ATCTCGCTGG AGCCGTCGGA GCTGGCGGCG CACCCGTTGC GGGTGGGGCT GTCGATGCGC
GCGACGGTGC AGACGAAGGC GCGCGGCGGG CATCTGCTGG ACGGCGACGC GCCGCTGCCG
GCGCAGCGCA CGCGGGTGCA CGAAATGCAC GCGGGCGAGG CGGAGGCGGC GGCCGAGGCG
GTGATCCGCG CGAACGACGG TGGGCAGTGA
 
Protein sequence
MSGRDDARTS ASGECREREN VNSNASFTVY TRDSTDTDTA AEHRSAPRRA AAAPGPVRSA 
PAGATDITHA TILNDTATDT ARAKAPTDPA VSDGAPASGH GLPASPETAA TLAARRATRR
RRFAWFFGVL AIVALGAALY WFIVGRFSEE TDDAYVAGNV VQIAAQIQGT VTDVLVADTQ
QVKAGQALVR LDDAEAAAAF AQAQAQLAQA VRQVANTRLS MQTYEQTVKA READLKLAQQ
AYRARAGASV EVVAPEELAR AKSSLANAQA ALAGAQAQRE AARALGSERP VGQNPAVQQA
AAQFKLAYRN LKRTTIVSPV DGTVGQRSVQ IGQQVGPGVP LMSVVQLRQV WVEANFKEGQ
LRHMRVGQPV RLESDLYGAR VTYHGRVEGF SAGTGSAFSM LPSQNAAGNW IKVVQRLPVV
ISLEPSELAA HPLRVGLSMR ATVQTKARGG HLLDGDAPLP AQRTRVHEMH AGEAEAAAEA
VIRANDGGQ