| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0337 |
|---|
| Symbol | |
|---|
| ID | 3692462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 486417 |
|---|
| End bp | 487910 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637730591 |
|---|
| Product | D-lactate dehydrogenase (acceptor: cytochrome) |
|---|
| Protein accession | YP_335496 |
|---|
| Protein GI | 76818315 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAAG TGACCGACGA CGGACAGCAG TGGGACGGGC GGGCGGCGGC TTTCGCGGGC
GTGCCGCCCG GCGGCGGCGC GCCTGCCGCA TTCGCCACGC CGCAGACGAT CGGGCGCTGC
GTCGAGGCGT TGCGCGCGAT CGTCGGCGAG CGCCTCGCAG TCGGGCGCGC GGTGCGCGAG
CAGCACGGCA AGGACATCTC GTTCCATCCG GGCGCGCCGC CCGACGCCGT CGCGTTCGTG
CGGACGACGG CCGAGGTCGC CGAGATCACA CGCGCATGCC ATCGGCTGCG CGTGCCGCTG
ATTCCGTTCG GCACCGGCAC GTCGTGCGAG GGGCACATCG CCGCGCTGCG CGGCGGCGTA
TGCATCGATC TGTCCGGCAT GAACCGGATT CTGCGCGTGA GCGCCGAGGA TCTCGACTGC
ACGGTCGAGG CGGGGGTGAC GCGCAAGCAG CTCAATGCGC ACCTGCGCGA CACGGGGCTC
TTCTTTCCGA TCGACCCGGG CGCGGACGCG TCGATCGGCG GCATGTGCTC GACGCGCGCG
TCCGGCACGA ACGCGGTGCG CTACGGGACG ATGCGCGAGA GCGTGCTCGC GCTCGAAGTC
GTGCTGCCGA ACGGCGACGT CGTCTCGGTC GGCTCGCGTG CGCGCAAGTC GGCGGCGGGC
TACGATCTCG CGCGCCTGTT CGTCGGCGCG GAAGGCACGC TCGGCACGAT CACGGGCGTC
ACGCTGCGGC TGCATCCGCG CCCGGACCGG TTATCCGCCG CGGTGTGCAG TTTCCCGGAC
CTGAAGGCCG CGGTCGACTC GGTGATCGGC GTCATCCGCA GCGGCGTGCC GATCGCGCGC
GTCGAGTTGC TCGACGCACT GCAGATCGTC GCGTGCAACC GCTATGCGAA GCTGAGCCTC
GACGAGCGGC CGACGCTCTT TTTCGAGTTC GCGGGGTTCG GCGCGGCCGT CGACGAGCAG
ATCGACTGGG TCGGGGAGAT TTGCGCGGGC TACGGCGGCG GTGAATTCCG CTGGGCGTCG
CGCCCGGAGG AGCGCAGCGC GCTGTGGGCG GCGCGGCACG ACGCGTGGTG GGCGGCGCTC
GCGCTGCGGC CCGGCTGCGA GGGGATGCCG ACCGATTCGT GCGTGCCCGT GTCGCGGCTC
GCGGAGGCGG TGCTCGCCGC GCGCGCGGAC GTGGACGCGC TCGGCCTCGT CGCGACGATC
TGCGGGCACG TCGGCGACGG CAACTTTCAC GTATGCATCG CGATCGATCC GGCCGACGCG
GACGAACTCG CGCGCGCAAC CGAGCTGAAC CGGCGGCTCG CGCTGCGCGC GATCGCGTTG
GGCGGCACCT GCACGGGCGA GCACGGCGTC GGTTACGGGA AGATCGGCTA CCTGGAGCGT
GAGCATCCGA CGGCGCTGCA ACTGATGGCG GCCGTCAAGC GCGCGCTCGA TCCGCGCGGC
ATCATGAATC CGGGCAAGGT GCTGCATCAC GACCGGTATC CGCCGTTCGA CTGA
|
|---|
| Protein sequence | MREVTDDGQQ WDGRAAAFAG VPPGGGAPAA FATPQTIGRC VEALRAIVGE RLAVGRAVRE
QHGKDISFHP GAPPDAVAFV RTTAEVAEIT RACHRLRVPL IPFGTGTSCE GHIAALRGGV
CIDLSGMNRI LRVSAEDLDC TVEAGVTRKQ LNAHLRDTGL FFPIDPGADA SIGGMCSTRA
SGTNAVRYGT MRESVLALEV VLPNGDVVSV GSRARKSAAG YDLARLFVGA EGTLGTITGV
TLRLHPRPDR LSAAVCSFPD LKAAVDSVIG VIRSGVPIAR VELLDALQIV ACNRYAKLSL
DERPTLFFEF AGFGAAVDEQ IDWVGEICAG YGGGEFRWAS RPEERSALWA ARHDAWWAAL
ALRPGCEGMP TDSCVPVSRL AEAVLAARAD VDALGLVATI CGHVGDGNFH VCIAIDPADA
DELARATELN RRLALRAIAL GGTCTGEHGV GYGKIGYLER EHPTALQLMA AVKRALDPRG
IMNPGKVLHH DRYPPFD
|
|---|
| |