| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0329 |
|---|
| Symbol | |
|---|
| ID | 3692069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 475885 |
|---|
| End bp | 477084 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637730583 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_335488 |
|---|
| Protein GI | 76819170 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.021088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGG CGTTCGATGC CCCTGCATCC GCGGCAGCCG CGGCTTTCCC CCCGGCGGAC
GACGCCGCGC TCGCCGCACG GCTCGACCGC GTGCTCGGCG CGGCGCTCGG CGAGCGGCGC
ATCGTCGGCG CGGTCGCGCT CGCCGCGCGG CACGGCCGGC TCGTCTACCG GCGCGCGCAC
GGTCTCGCGG AGCGCGAGAC GCAGCGGCCG ATGCGCGAGG ACACGCTGTT TCGGCTGTCG
TCGATCACGA AGCCGATCGT CACCGTCGCG GTGCTGCGCC TCGTCGCCGA CGGCCGAATG
GCGCTCGACG CGCCGATCAC GCGCTGGCTG CCCGATTTCG CGCCCGCGCT GCCCGACGGC
CGGGCGCCCG CGCTGAGCGT GCATCAACTG CTGACCCACA CGGCGGGCCT GAGCTACTGG
CTGCTCGAAG CGCCCGGCTC GGCCTATCAC ACGCTCGGCG TCTCGGACGG CATCGATCTC
GTCGACTTCG ATCTCGCGGA GAACCTGCGG CGCATCGCGG CCGCGCCGCT CGCGTTCGAG
CCGGGCAGCG CGTGGCGCTA TTCGCTCGCG CTCGACGTGC TCGGCGCGGC GATCGAGCGC
GAGACGGGGC GCGCGCTGCC GGACGCGGTC GCGCGGCTCG TCACGACGCC GCTCGGGATG
CACGACACGG GCTTCGTCGC GGCCGACCCC GCGCGTTTCG CGGTGGCGTA CGCGAACGCC
GCGCCGGAGC CCGCGCGGAT CACCGACAAC CTCGACGTGC CGTTGCCCGA GGGGCACGGC
GTCGCGGTGC GCTTCGCGCC GTCGCGGGTG TTCGACGCGA CGGCGTTCGC GTCGGGCGGC
GCGGGGATGT ACGGCAGCGC CGACGACGTG CTGCGCGTGC TCGAGACGAT CCGCACGGGC
GGCGACGGTT TCCTGCCGGC CGCGCTCGTC GCCGCGATGC GCACCGATCA CACGGGGCCG
GCCGCCGGCA CGCGCGGGCC CGGCTGGGGC TTCGGCTATG GCGGCGCGGT GCTGTCCGAT
CCGGCGCTCG CGCAGTCGCC GCAGAGCGCG GGAACCCTGC AATGGGGCGG CGTCTACGGG
CATTCGTGGT TCGTCGACGC GGCGCGCGGG CTCACCGTGC TGTTGATGAC GAACACCGCG
TATGAAGGGA TGTCGGGGCC GTTGACGCTC GAGGTGCGCG ACGCGGTGTA CGGCGTGTGA
|
|---|
| Protein sequence | MNSAFDAPAS AAAAAFPPAD DAALAARLDR VLGAALGERR IVGAVALAAR HGRLVYRRAH
GLAERETQRP MREDTLFRLS SITKPIVTVA VLRLVADGRM ALDAPITRWL PDFAPALPDG
RAPALSVHQL LTHTAGLSYW LLEAPGSAYH TLGVSDGIDL VDFDLAENLR RIAAAPLAFE
PGSAWRYSLA LDVLGAAIER ETGRALPDAV ARLVTTPLGM HDTGFVAADP ARFAVAYANA
APEPARITDN LDVPLPEGHG VAVRFAPSRV FDATAFASGG AGMYGSADDV LRVLETIRTG
GDGFLPAALV AAMRTDHTGP AAGTRGPGWG FGYGGAVLSD PALAQSPQSA GTLQWGGVYG
HSWFVDAARG LTVLLMTNTA YEGMSGPLTL EVRDAVYGV
|
|---|
| |