Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0329 |
Symbol | |
ID | 3692069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 475885 |
End bp | 477084 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637730583 |
Product | beta-lactamase |
Protein accession | YP_335488 |
Protein GI | 76819170 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.021088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCGG CGTTCGATGC CCCTGCATCC GCGGCAGCCG CGGCTTTCCC CCCGGCGGAC GACGCCGCGC TCGCCGCACG GCTCGACCGC GTGCTCGGCG CGGCGCTCGG CGAGCGGCGC ATCGTCGGCG CGGTCGCGCT CGCCGCGCGG CACGGCCGGC TCGTCTACCG GCGCGCGCAC GGTCTCGCGG AGCGCGAGAC GCAGCGGCCG ATGCGCGAGG ACACGCTGTT TCGGCTGTCG TCGATCACGA AGCCGATCGT CACCGTCGCG GTGCTGCGCC TCGTCGCCGA CGGCCGAATG GCGCTCGACG CGCCGATCAC GCGCTGGCTG CCCGATTTCG CGCCCGCGCT GCCCGACGGC CGGGCGCCCG CGCTGAGCGT GCATCAACTG CTGACCCACA CGGCGGGCCT GAGCTACTGG CTGCTCGAAG CGCCCGGCTC GGCCTATCAC ACGCTCGGCG TCTCGGACGG CATCGATCTC GTCGACTTCG ATCTCGCGGA GAACCTGCGG CGCATCGCGG CCGCGCCGCT CGCGTTCGAG CCGGGCAGCG CGTGGCGCTA TTCGCTCGCG CTCGACGTGC TCGGCGCGGC GATCGAGCGC GAGACGGGGC GCGCGCTGCC GGACGCGGTC GCGCGGCTCG TCACGACGCC GCTCGGGATG CACGACACGG GCTTCGTCGC GGCCGACCCC GCGCGTTTCG CGGTGGCGTA CGCGAACGCC GCGCCGGAGC CCGCGCGGAT CACCGACAAC CTCGACGTGC CGTTGCCCGA GGGGCACGGC GTCGCGGTGC GCTTCGCGCC GTCGCGGGTG TTCGACGCGA CGGCGTTCGC GTCGGGCGGC GCGGGGATGT ACGGCAGCGC CGACGACGTG CTGCGCGTGC TCGAGACGAT CCGCACGGGC GGCGACGGTT TCCTGCCGGC CGCGCTCGTC GCCGCGATGC GCACCGATCA CACGGGGCCG GCCGCCGGCA CGCGCGGGCC CGGCTGGGGC TTCGGCTATG GCGGCGCGGT GCTGTCCGAT CCGGCGCTCG CGCAGTCGCC GCAGAGCGCG GGAACCCTGC AATGGGGCGG CGTCTACGGG CATTCGTGGT TCGTCGACGC GGCGCGCGGG CTCACCGTGC TGTTGATGAC GAACACCGCG TATGAAGGGA TGTCGGGGCC GTTGACGCTC GAGGTGCGCG ACGCGGTGTA CGGCGTGTGA
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Protein sequence | MNSAFDAPAS AAAAAFPPAD DAALAARLDR VLGAALGERR IVGAVALAAR HGRLVYRRAH GLAERETQRP MREDTLFRLS SITKPIVTVA VLRLVADGRM ALDAPITRWL PDFAPALPDG RAPALSVHQL LTHTAGLSYW LLEAPGSAYH TLGVSDGIDL VDFDLAENLR RIAAAPLAFE PGSAWRYSLA LDVLGAAIER ETGRALPDAV ARLVTTPLGM HDTGFVAADP ARFAVAYANA APEPARITDN LDVPLPEGHG VAVRFAPSRV FDATAFASGG AGMYGSADDV LRVLETIRTG GDGFLPAALV AAMRTDHTGP AAGTRGPGWG FGYGGAVLSD PALAQSPQSA GTLQWGGVYG HSWFVDAARG LTVLLMTNTA YEGMSGPLTL EVRDAVYGV
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