Gene BURPS1710b_A0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0315 
Symbol 
ID3694567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp456900 
End bp458354 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content71% 
IMG OID637730569 
ProductGGDEF domain-containing protein 
Protein accessionYP_335474 
Protein GI76818658 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.237701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGATCG CCGGCGCGGT GGCGGTCGCG ATCGTCATGA TGTCCATCTG CGCGGCGATC 
CTGCGCGACA GCCGCGACGA CGCCTTCGAG CACGCGCAGC GCGCCGCGCG CAACACGCTG
CAGATGATCG AGCGCGACGT CACGCGCGGC TTTCGGCTGT ACGACCGCAC GCTCGCGCGC
ATCGCCGCGC AGTTCGGCGA TCGCCGGATC GCGGCGCTGC CCGCCGGCCT GCGCCGCGAG
ATCCTGTTCG ATTCCGCGGC GGCCGCCAAC GAGGCCGGCG TGATGTACGT GCTCGACGCG
AGCGGGCACG TGACGCTCGC GTCGACGCGC GGCCCGCTGC CGGCCGAGCG CTTCGCGTCG
TACGATTTCT TCGCCGCGCA GCGCGATACG CCGGCGCTCG GCATGTATCT GAGCGGGCCG
TACCGGATGT CGTCGCGCGA CGGCGAGCCG TACGTCGCGT TGTCGCGCCG CATCGAGCGC
GCGGACGGCG CGTTTGCGGG CGTCGTCGTG CTCGCGGTGC GCATTGCGTA TTTCCGGCAA
CTGCTGGCGG CGGCGAATGT GGGCCCGCAC GGCGCGCTCG TGCTGATGCA CACGGACGGG
CGCATCCTGA TGCGGATTCC GTTCGACGAG AAATTCGTCG GCCTCGACCT GACCGGGACG
AGCCTCTACT CGCGCATGCA GTTCGGCCGT TCCGGCGAGT TCTTCGACGT CGAGCCGATC
GATCACGTGA AGCGCTTCTA TCTGTATCGC CGGCTCGACG ACGTTCCGCT CGTCGTGCAG
GTGGCGATCG CCGACGACGA CATCTATGCG ACCTGGCGTC TGCGCGCGTG GCGCTTCGGC
GTGCTGACGG GCGTGTTCGC GCTGATCTTC GTCGTGATGA GCGCGTACCT CGCGCATTCG
CTGTGGCGCA AGTCGACGGC CGAGGCGGCG CTCGCGCGGC TCGCCGGCAC CGACAGCCTC
ACGGGCCTCT ACAACCGGCG CGCGCTCGAC GAGACGCTCG AGCGCGAATG GCGGCGCGCG
GTGGGCGGCG ATCGTCCGCT CGCGATCCTG TTCGTCGACA TCGATCACTT CAAGCGCTAC
AACGACACGT ACGGCCATCA GGTCGGCGAC GAGGTGCTCG CGACGGTGTC GCGCTGCATC
GCGCAGCAGG CGGCGCGGCT CGGCGACGTC GTCGCGCGCT ACGGCGGCGA GGAATTCGTC
GTCGTGCTGC CGGATACGCC GCGCGGCGGC GCGCTCGTCG TCGCCGAGCG CGTGCGGCTC
GGCGTGCGGA TGCTCGGCAT CGAGCACGAA GGCTCGGAGG TCGGGTTCGT GACGGTCAGC
GTCGGCGTCG CGGTGTGGCA TCCGGACGGC GCGTCCGCGC CGCATATCGC CGCGATCGTC
GAGGCGGCCG ATCAGGCGCT CTATCGGGCG AAGGCGGACG GGCGCAATCG CGTCGTCGAC
CTCGGGCTCG GCTAA
 
Protein sequence
MVIAGAVAVA IVMMSICAAI LRDSRDDAFE HAQRAARNTL QMIERDVTRG FRLYDRTLAR 
IAAQFGDRRI AALPAGLRRE ILFDSAAAAN EAGVMYVLDA SGHVTLASTR GPLPAERFAS
YDFFAAQRDT PALGMYLSGP YRMSSRDGEP YVALSRRIER ADGAFAGVVV LAVRIAYFRQ
LLAAANVGPH GALVLMHTDG RILMRIPFDE KFVGLDLTGT SLYSRMQFGR SGEFFDVEPI
DHVKRFYLYR RLDDVPLVVQ VAIADDDIYA TWRLRAWRFG VLTGVFALIF VVMSAYLAHS
LWRKSTAEAA LARLAGTDSL TGLYNRRALD ETLEREWRRA VGGDRPLAIL FVDIDHFKRY
NDTYGHQVGD EVLATVSRCI AQQAARLGDV VARYGGEEFV VVLPDTPRGG ALVVAERVRL
GVRMLGIEHE GSEVGFVTVS VGVAVWHPDG ASAPHIAAIV EAADQALYRA KADGRNRVVD
LGLG