| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0315 |
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| Symbol | |
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| ID | 3694567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 456900 |
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| End bp | 458354 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637730569 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_335474 |
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| Protein GI | 76818658 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.237701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGATCG CCGGCGCGGT GGCGGTCGCG ATCGTCATGA TGTCCATCTG CGCGGCGATC
CTGCGCGACA GCCGCGACGA CGCCTTCGAG CACGCGCAGC GCGCCGCGCG CAACACGCTG
CAGATGATCG AGCGCGACGT CACGCGCGGC TTTCGGCTGT ACGACCGCAC GCTCGCGCGC
ATCGCCGCGC AGTTCGGCGA TCGCCGGATC GCGGCGCTGC CCGCCGGCCT GCGCCGCGAG
ATCCTGTTCG ATTCCGCGGC GGCCGCCAAC GAGGCCGGCG TGATGTACGT GCTCGACGCG
AGCGGGCACG TGACGCTCGC GTCGACGCGC GGCCCGCTGC CGGCCGAGCG CTTCGCGTCG
TACGATTTCT TCGCCGCGCA GCGCGATACG CCGGCGCTCG GCATGTATCT GAGCGGGCCG
TACCGGATGT CGTCGCGCGA CGGCGAGCCG TACGTCGCGT TGTCGCGCCG CATCGAGCGC
GCGGACGGCG CGTTTGCGGG CGTCGTCGTG CTCGCGGTGC GCATTGCGTA TTTCCGGCAA
CTGCTGGCGG CGGCGAATGT GGGCCCGCAC GGCGCGCTCG TGCTGATGCA CACGGACGGG
CGCATCCTGA TGCGGATTCC GTTCGACGAG AAATTCGTCG GCCTCGACCT GACCGGGACG
AGCCTCTACT CGCGCATGCA GTTCGGCCGT TCCGGCGAGT TCTTCGACGT CGAGCCGATC
GATCACGTGA AGCGCTTCTA TCTGTATCGC CGGCTCGACG ACGTTCCGCT CGTCGTGCAG
GTGGCGATCG CCGACGACGA CATCTATGCG ACCTGGCGTC TGCGCGCGTG GCGCTTCGGC
GTGCTGACGG GCGTGTTCGC GCTGATCTTC GTCGTGATGA GCGCGTACCT CGCGCATTCG
CTGTGGCGCA AGTCGACGGC CGAGGCGGCG CTCGCGCGGC TCGCCGGCAC CGACAGCCTC
ACGGGCCTCT ACAACCGGCG CGCGCTCGAC GAGACGCTCG AGCGCGAATG GCGGCGCGCG
GTGGGCGGCG ATCGTCCGCT CGCGATCCTG TTCGTCGACA TCGATCACTT CAAGCGCTAC
AACGACACGT ACGGCCATCA GGTCGGCGAC GAGGTGCTCG CGACGGTGTC GCGCTGCATC
GCGCAGCAGG CGGCGCGGCT CGGCGACGTC GTCGCGCGCT ACGGCGGCGA GGAATTCGTC
GTCGTGCTGC CGGATACGCC GCGCGGCGGC GCGCTCGTCG TCGCCGAGCG CGTGCGGCTC
GGCGTGCGGA TGCTCGGCAT CGAGCACGAA GGCTCGGAGG TCGGGTTCGT GACGGTCAGC
GTCGGCGTCG CGGTGTGGCA TCCGGACGGC GCGTCCGCGC CGCATATCGC CGCGATCGTC
GAGGCGGCCG ATCAGGCGCT CTATCGGGCG AAGGCGGACG GGCGCAATCG CGTCGTCGAC
CTCGGGCTCG GCTAA
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| Protein sequence | MVIAGAVAVA IVMMSICAAI LRDSRDDAFE HAQRAARNTL QMIERDVTRG FRLYDRTLAR
IAAQFGDRRI AALPAGLRRE ILFDSAAAAN EAGVMYVLDA SGHVTLASTR GPLPAERFAS
YDFFAAQRDT PALGMYLSGP YRMSSRDGEP YVALSRRIER ADGAFAGVVV LAVRIAYFRQ
LLAAANVGPH GALVLMHTDG RILMRIPFDE KFVGLDLTGT SLYSRMQFGR SGEFFDVEPI
DHVKRFYLYR RLDDVPLVVQ VAIADDDIYA TWRLRAWRFG VLTGVFALIF VVMSAYLAHS
LWRKSTAEAA LARLAGTDSL TGLYNRRALD ETLEREWRRA VGGDRPLAIL FVDIDHFKRY
NDTYGHQVGD EVLATVSRCI AQQAARLGDV VARYGGEEFV VVLPDTPRGG ALVVAERVRL
GVRMLGIEHE GSEVGFVTVS VGVAVWHPDG ASAPHIAAIV EAADQALYRA KADGRNRVVD
LGLG
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