| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0296 |
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| Symbol | |
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| ID | 3692725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 439125 |
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| End bp | 440555 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637730550 |
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| Product | outer membrane protein TolC, putative |
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| Protein accession | YP_335455 |
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| Protein GI | 76818773 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.618695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA CAGAGAATTT GGGTGCCTCG TCTAAATTTC GGCATGCGGG TTTTCACTTA
ACGACAAAAT CTTTTCGGCT TCGCGCCAAT GTGGCCTACG TTACCGTTTG CGCGGTGCTT
GCCGCACTCG GCACCGGTTC CGAATCCGCA CGTGCGTTCT GTCTCGACGA GGCTTATCAG
CACGCAATAT CGAACGATCC GAAATTTCTC CAGGCGCGGG CGGAATACGA CGCCGCGCGG
CAGAAGTTTC CGCAGGCGCG CGCGCAGATG CTGCCGCAGG TGAGCGCGCA GCTCGAATGG
GGCCGCTACG GCACGCACGC GAACCTGTTC GGCATCGACG TGAGCGGCAA CAGCACCGCC
GCGTACGGCG CCGCGCAGCT CTCGCAGGCG CTGTTCAACA TGCCGTATTT GTACGACATG
AGCCGCGCGA AGGAATTCGA GGAATCCGCG CGGCAGCAGC TCGAAGTCGC GAAGCAGGAG
CTGATCATGC GCGTCGCGAA CGCGTGCTTC GATCTGCTGT CCGCGCGCGA GAAGCTGCAG
CTCGCCGACG ACGAGGTCGG CGCGCTCACG CGCCTGGAGA GCGATACCCG CCGCATGGCG
CAGCTCGGCA TGAAGACCAT CGGCGACACG GCCGAGATCG AGGCGCGCAG GAGCCTCGCG
CAGTCGGACG AGGCGCTCGC GCGCACCGAC GTCGAGGCGC GGCGCGCCCG CTACGAGACG
CTGCTCGGCT CCGCGATCGA CTTCACGCGC TGGCCGCGGC TCGCGATGCA CGGCACGTCG
CCGCGCATTC CGACGGGCGA CTACCAGCCG CAGGACAACC CGTCGTACCA GCAGGCGTAT
CGCGACCTGC GCGTCGCGCG GCTCGCGTCC AAGCGCATCA ACGCGGAGCA CCTGCCGAGC
GTCGACCTGT TCGCGACGTA CTCGCGCGGC CTCAATCCGA ACCTGCGCGG CCTCACCGAC
AAGAACGACT TCCACCAGAG CGCGGTCGGC GTGCAGGTGA CGATTCCGAT CTTCTCGGGC
GGCAGCGTGC ACTACCGGAA GATCGAGGCC GATCACGTCG CGACGCAGTA CCAGAACCGG
CTGCGCGAGG TCGAGCAGCA ACTGAGCACC GATCATCGCG AGACGCTCGC GGCGCTGCAG
TCGATCGGCA CGCGGATCCG CGCGCTGCAG CAATCGCTGC AGGCGGCGCG GCTCGCGTAC
GATTCGTCGA TGAAGGCGCA CCAGGTCGGC TACAGCACGA CGTACGAGAC GCTGAACCTG
CGCACCGACA TCTCGAACAT CCGCCAGAAG CTGTTCGAGA GCTACCTCGA CGCGCTGAAG
CTCCAGCTGA AGCTCAAGGG CATTCTCGGC ACGCTGGACG AGCAGTCGCT CGTCGCGGTC
GACAGCTTCC TCGCGAGCAA CGCGGCGCCC GCCGATCAGA AGAGCGAATG A
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| Protein sequence | MFETENLGAS SKFRHAGFHL TTKSFRLRAN VAYVTVCAVL AALGTGSESA RAFCLDEAYQ
HAISNDPKFL QARAEYDAAR QKFPQARAQM LPQVSAQLEW GRYGTHANLF GIDVSGNSTA
AYGAAQLSQA LFNMPYLYDM SRAKEFEESA RQQLEVAKQE LIMRVANACF DLLSAREKLQ
LADDEVGALT RLESDTRRMA QLGMKTIGDT AEIEARRSLA QSDEALARTD VEARRARYET
LLGSAIDFTR WPRLAMHGTS PRIPTGDYQP QDNPSYQQAY RDLRVARLAS KRINAEHLPS
VDLFATYSRG LNPNLRGLTD KNDFHQSAVG VQVTIPIFSG GSVHYRKIEA DHVATQYQNR
LREVEQQLST DHRETLAALQ SIGTRIRALQ QSLQAARLAY DSSMKAHQVG YSTTYETLNL
RTDISNIRQK LFESYLDALK LQLKLKGILG TLDEQSLVAV DSFLASNAAP ADQKSE
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