Gene BURPS1710b_A0278 details

Gene Information

• Locus tag: BURPS1710b_A0278
• Symbol: rpoE6
• ID: 3694431
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 422311
• End bp: 422817
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637730532
• Product: ECF subfamily RNA polymerase sigma factor
• Protein accession: YP_335437
• Protein GI: 76819323
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.25903
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGTG CAGATATCGC TTCTACACTT CCGCCGTTGC TACCCCGTCT GCTCGCCTTC 
GCTCGCCGCC TCTGCGGCGA TACGCACGAC GCCGATGATC TGGTGCAGCG TGCGTGCCTG 
AGGGCGCTCG AGCGCCCTCA TCAATTGCAG CGGGATACGT CGCCGCTCAA TTGGATGATG 
GCGATCGTGC ATTCGAGCTG GATGAGCGAA TTGCGCGCGA GGCATGTGCG GCATCGATTG 
CAAACCGACT GGAACGACGA CGTCATCGAC GCGCTGCCCG GGCCGACGGC CGCCGATCCG 
CAAATCCACG CGATGAATGC GCAGATCATT CGCGCCGTCG AATTGCTGCC TGAAACACTG 
CGCGCGGCGA TGCTGCTGAT TGCCGTCGAA GGGCTGAGCT ACCAGGAAGC GGCCGGCGTG 
CTCGACGTGC CGATCGGAAC CGTGATGAGC CGCCTGTGGC GCGCGCGCCA ATCCATCGGC 
GCGCAGTTCG GCGCGCGCGA GCGCTAG 

 

Protein sequence

MTGADIASTL PPLLPRLLAF ARRLCGDTHD ADDLVQRACL RALERPHQLQ RDTSPLNWMM 
AIVHSSWMSE LRARHVRHRL QTDWNDDVID ALPGPTAADP QIHAMNAQII RAVELLPETL 
RAAMLLIAVE GLSYQEAAGV LDVPIGTVMS RLWRARQSIG AQFGARER