| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0242 |
|---|
| Symbol | nirD |
|---|
| ID | 3694267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 361813 |
|---|
| End bp | 362163 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637730496 |
|---|
| Product | nitrite reductase (NAD(P)H), small subunit |
|---|
| Protein accession | YP_335401 |
|---|
| Protein GI | 76819803 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.759225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC AACCTCAAGC ATCCGCGTGG ACGCCCGTCT GCGCGCTCGA CGAGATCGTG
CCGAACACCG GCGTGTGCGC GCTCGTCAAC GGCGAGCAGA TCGCCGTGTT CCACGTCGAC
GACGGCGGCG GCGGCCGCGC GTTCGCGATC GGCAACGTCG ATCCGCATTC GCAGGCCGCC
GTGCTCTCGC GCGGGCTGAT CGGCAGCCTC GGCGAGCGGA TCGTCGTCGC ATCGCCGCTC
TACAAGCATC ATTTCGACCT GCGCACGGGC GAGTGCGTCG AGGCGCCGGA GAAATCGGTG
AGCGCGTATC CGTCGCGCGT CGAGGACGGC TACGTGTGGG TCGCGGCGTG A
|
|---|
| Protein sequence | MNRQPQASAW TPVCALDEIV PNTGVCALVN GEQIAVFHVD DGGGGRAFAI GNVDPHSQAA
VLSRGLIGSL GERIVVASPL YKHHFDLRTG ECVEAPEKSV SAYPSRVEDG YVWVAA
|
|---|
| |