Gene BURPS1710b_A0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0194 
Symbol 
ID3693103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand+ 
Start bp297435 
End bp297872 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID637730449 
Productcarboxymuconolactone decarboxylase family protein 
Protein accessionYP_335354 
Protein GI76818914 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.401663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCC GTCTCGACTA CCGCAAGGCG AATCCGCACG CGCTCAACGC GATGCTCGCG 
CTCGAGGAGC GGATCGCGCA AAGCGGGCTG GAGCCGACGC TGATCGAGCT CGTGCGGCTG 
CGCGCCTCGC AGATCAACGG CTGCGCGTAC TGCGTCGACA TGCACACGCG CGACGCGCGC 
AAGCACGGCG AAACCGAGCG CCGCCTCGCG ACGGTCGTCG TCTGGCGCGA AGCGCCGTTC 
TTCACCGACC GCGAATGCGC GGCGCTCGAA TGGACCGAGG CGGTGACGCT CGTCGCGCAC 
GATCACGTGC CCGACGCGGT CTGGGAGGCG GTGCGTCCGC ATTTCACCGA TGCCGAGCTC 
GTCGACCTGA CGCTCGCCAT CGTGACGATC AACGGCTGGA ACCGCTTTGC GGTGTCGTTT 
CGCAAGCTGC CGGCATGA
 
Protein sequence
MQTRLDYRKA NPHALNAMLA LEERIAQSGL EPTLIELVRL RASQINGCAY CVDMHTRDAR 
KHGETERRLA TVVVWREAPF FTDRECAALE WTEAVTLVAH DHVPDAVWEA VRPHFTDAEL 
VDLTLAIVTI NGWNRFAVSF RKLPA