Gene BURPS1710b_A0177 details

Gene Information

• Locus tag: BURPS1710b_A0177
• Symbol: tcdB2
• ID: 3693145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 257254
• End bp: 264630
• Gene Length: 7377 bp
• Protein Length: 2458 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637730431
• Product: insecticidal toxin complex protein TcdB2
• Protein accession: YP_335336
• Protein GI: 76818800
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3209] Rhs family protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCCGC TGCCCACCAC CACGCCGACA CCGCCGCTGC AGGTCGTCAC CGCCGCGTTC 
CCGAAGGGCG GCGGCGCCCT GCCGGGGCTG GGCCAAACCC TGAGCCCGAG CGGGATGAGC 
GGCGCCGCGC AGCTGTCGAT CGCCTTGCCG CTGCCGCCGG TGCGGCTCGC CCCCGCGCTT 
GCCCTGACGT ACCACAGCCA ACAGGGCAAC GGCCCGTTCG GGTTGGGGGT GGCACTGACG 
CTGCCGACGC TTGCCCGCCA GACCAGCCGC GGCACGCCCA GCTACGCGGA CGGACGCGAT 
GTCTTCGTGT TCGAGGGCGA TGAACTGGTA CCGGACGCGG CCGGGCCGAC GGAGGTGGAC 
AACGAGCGTC TCACCCGCTA CCACATGCGC CACGAGGGAC GGTTCGACTA CCTCGAGCTG 
CATCAGCCGC TTACGCCCGC CGATGCGCCC GCCCCCGCCT GGTGGCGGGT GTGGCGTGCC 
GACGGCCGGT GCGAGGTGTT CGGCCGCTGC GCGGCCGCCC GCACCGCGGT CCCCGGCAAC 
CCGGCGCAGG TGCTTGAATG GCATCTTGAG GAAACGGTGA GTCCGCACGG CGAACATGTG 
TACTACAGCT ACGCGCCCCG CGAAGCGGAG GCAGCTCGCA CGCAGCTCGC GTGCCTCAAG 
CAGGTGCGCT TCGGCAATGT GCGTGCGGAT CCGGCGCCGT GGTCGACCGC GCAAGGCTTC 
GACCCGGCCA CCGAGCGCTG GCTGTTCGCG CTGGTGTTCG ACTACGGCGA ACATGCCGAC 
ACGCCGCAGG GGCCGGCCTG GGCCGCGAGC CGGCCATGGC GTCGCCGCGC CGACCCGTTC 
TCGCGCTTCG ATGGCGGCTT CGAGCTGCGC TGCGAGCGGC TGTGCCAGCG CATCGTATTG 
TTTCACCAGC TCGCCGCGCT GGGTGCCGAA CCGGTGGCGG TGCGCGCGCT GCAGCTCAGC 
CACACGGAAA CCGCGTACCT GACCCAGCTG ACCGGCGTGC GCCAGCACGG TTATCGGCAA 
ACCGGCGGAG CGCTCGAGCA GGCCGCGCTG CCGCCGCTGG CGCTGGAGTA CACGAGGTTC 
GACCTGGGCC GCGCGGACTT CCGTGCGCTC GAGGCGGGGC TGGTTGGGCT CAATGCGGGC 
TTCTATCAGG TGGTCGACCT CTACGGCGAG GGCGTGCCCG GGATTCTGTA CAACGACGGC 
CAGAGCTACC GGTACCGCCG CGCCAAAAAT GTCAAGCGCG GTGACCAGGG GCTGGACGTC 
GAGTACGAGG CGGCGCAGTC ACTGAGCGTA CCCGGTGGCG AGATGAGCGC CGCAGCCTTG 
ATGGACATCA CCGGCGACGG CATCCTCGAT GCCGTGCGCA CCGAGCCGGG CATGGCCGGC 
TTCTTTACGC GCGACGGTGA CAAAGGCTGG CAGCGCTTCA TCCCGTTTGC CGCCTTCCCG 
AGTGAGTTCC TCCATCCCCG GGCGTTGCTC GCCGACCTGA GCGGCGACGG CCTGGCGGAC 
CTGGCGCTGA TCGGTCCCAG CAGTGTGCGC TTGTTCGTCA ATCGGGGCCA CGACGGCTTT 
GCTCCGCCGC GCCAGATCGA CCACCTCGGC CCGGACCGCC TGCCGGTGCC CCCGGGCGGC 
GGCCAGACCC TGACGGCCTT CGCCGACGTG CTCGGCAGCG GCCAGCCGCA CCTGGTGCGG 
GTTCGCCATA ACGAGGTGAC CTGCTGGCCC AATCTGGGCC AGGGCCGCTT CGGCGCGCCG 
CGCACCCTGC GACTGCGCCT GGATCCCGCG ATTACCGCGG CGAACTTCGA TCCCGCCCGC 
GTATGGCTGG CCGATCTCGA TGGCAGCGGC GCGGCCGACC TGCTGTATCT CGATCACCGC 
ACGCTTTACG TGCACCGCAA CCAGTGCGGC AATCGTTTCG CCAGGGCCCA GACGCTGAGC 
TTGCCGGCTG CGCTGCAGTA CACCGACCTG CACCAGGTGA GCGTGGCCGA CCTGTACGGC 
AACGGCACCA GCGTGCTGAT CATCAGCCGG CTCCATCCGC AGCCGGCACA CTGGGTGTGC 
GACTTCTCGC GCGGGCTCAA GCCCTATCTG TTGGCGGGGC TGAACGACAA CATGGGAGCC 
CAGACGCGCC TGACCTACGC CAGCTCCGCA CACGAATGGC TCGACGAGCG TCGTGCCGAT 
TCGCAGGCGC GTTGTCGCCT GCCGTTTCCG GTGTCGGTAC TCAAGCGGCT GGAGCAGGTC 
GACGAGATCA ATCACAACAC GCTGGAGCAG ACTCTTCAAT ACCGGCAGGG TTACTACGAT 
GGCGAGGAGC GCCAGTTCCG CGGCTTCGGA TTGATCCTGA GCACGGACAT GCCCAGCCCC 
TTGGGTGCCG CGCAGCGCGA CGCGGCCGGC ACCCCTTATA TTCCAGCGCT GCAGACGCGG 
ACCTGGTACT ACACCGGCGA CCCTGACAGT CCTGGCGCCG TGGACGGCAA CGTGGGCGGT 
TCCTCGTACA ACGGCGACCC GCTCGCGGCA GCCCTGTCGC CGCTGCGGAT CGAGAGGCGG 
GACGGTCAGG CCATCCCGTT GCCGCCGGGC ACGCCGGAGC GGCGCGTGCT TCTGCGGGCA 
CTGCGTGGCC GGGTGCGACG CGAGGAGGTG TACGGGCTGA ATCCAACCAC CGGCCAGCCC 
CAGGCCACGC CGTTCCGTGT GATGAGCCTG CGGTACTGCG TGCGGGAATG GCAACCGGCC 
ACTGCCTCGG GAGTGCCCGC CGTGCTGCTG GCGTTCGTGC TGGAAAGCCT AGATTACAAC 
TATGATCAGG TGTCTACCGA CCCGCAATGG CAGCAGACCG TGGCGCTGGC GGTGGACACG 
TACGGCATGG TCACGAAGAC CGTCAGCCTG CACTATCCGC GCCGTGCGCA AGTGATGCCG 
CCGATCATGC CATTGCCCGA GGCGGCCCAT TGCAGCGATG CGCAGCAGGA CACGTTCCTG 
GTCACGGAAA CCCGGATCCG CGTGACCCAT CTACAAGAAC CGAAACCGAA CCGAGCTGGC 
TGGCGACTGG GCCTGCCGGT CGAAAACCGG GACGAGATGC TCGGCCGGGT CGCCCCGCCG 
ACTTCCGCCA ACCGTGTCTA CAGCTATGAG GAGCTGACCA AGGCCGACGG TCCGCTGGCG 
AGCGCGACTC GCACCCTGGC CCGCTGGCAA CAGCAAATCT ATGCGGATCC GTCGACGGGT 
GACCCGCTCC CGCTGGCGCA GGCCACCCGC GAAGGGCTCG TTTGCCAGGT GCGCACGGCC 
GCCTTGAGCC AAGCCGAGTT GCGGAGGAGC TTTGAAGGCC TGATTCCGTC ACAGCAACTG 
GAACCGCTAC TCACGCAACT GGAAGACGAA CTGGTCAATC AAGCGGGATT CGTGCAGGGT 
ACGGCTGAGG ATGATAAGGA CTACTTCTGG AACCCTGGTC TGACTGCGAC ATTCGCAGAC 
TTGGCGGGGT TCTATACGGT GCGCTACCAC ACCGACCCGT TCGGCAACCG GACCACCTAC 
GAGCGCGACG CACTCACCCT CGCGCCCACC CTACTCAGCA ATGCACGGTT CACTGCGGCC 
TGGATCGACT ACGACCCTTG GAGCCTGCTG CCGGCCCAGA TCACCGACGC TAATGGGACG 
GTGCATGAAG TGAGCTATGA CCCGTTCGGC CGGGTACACC TGAGTGCGCT GAAAGGCAGC 
GAGCGCGCCT TCACCGACAG TCTGGGCGAG GCTCGAGTGG GCTTCGGTCC GCTGGCCGGC 
TACCGCTCGT CGGTCAAGAC GGTCGAAGCG GCCCTACGGG ATCCGACCGG CGCCCTCGGC 
AACGCCGCTC AGGCCTATTT CCATGCTGAT CACAGCTGGA TGGGCGCGCT GACCGAGGCC 
GGACTGCGCG CGGCAGGGCT GCCGGACAGC GAGGTTCAGG CCGTCTGGCA AATCTTGCTC 
CAGCAGCGCC TGATCACCGT GGAAGGCTAT GTCCAGGCTC GGCTGCATCA ACTCGCCAAG 
GCCGGCACGC CGGTGCCGGG GCTGAGCGAC ACCCAGAGCG CCGCCGTGCA TCGGGCCGTG 
GCCGCAGTGT CCCGGGTGCC GGTGCACGCG GCCACCCTGA GTGCCGAGCG CTACCGGGAT 
GAGCATGCTG ACGACCCGGT GCCGCGCCCA ACGGATCCCG TGATCCGGAT CGCCCTGGCC 
TATGTGGACG GGTTCGGGCG GCCGCTGCAG GGCAAGATCA AAGCGGAGGG CGGACTCAGT 
GCGATCGTCG AGGACGACGG CAAGCTCAAG CTCGATACCA GCGGCCGGCC GCTGCAGGAG 
CGCAGCGAGG AGCGCTGGCT GACCCAGGGT CACGTGGTGT ACAACGCCAA GGGGCTGCCC 
CGTCAGCAAT ACCAGCCGTA CTACCTGAAC CGGCCGGTCC ATCTCACCGA CCCGAAGCTG 
GACCAGCTGA GCGCGAGCGA CACGCTGTAT TACGACGCGC CGGGCCGGTT GGCGCAACTC 
ACCAAGGCCG ACGGCAACCG GCGCACGAGC CAGTACCGGC CGTGGTACCG GATCGAGACG 
GATGAAATGG GTGCGCCGGT CGCCACGGTC CATGACGGGC GCGGCCTGGC GGTGCGCACG 
GTCCAACGTC CCCCGCCCGG CGCCGCCACC GCGGACAAAG TCCGCATCAC CCGCCACGCG 
TACGACGCCG CCGGGCGGCT CGTCTCGAGC AGCGACCCGC GCTTCTTCGA TCGGCAGCAG 
GCCGGTGAGA CGACACTCGC CGGCAACGAA CGCTACCGCT ATGGGCTGTC GGGCTCTGCC 
GTGACCCGCG AGAGCCGCGA CGCCGGCTGG CAGGTCGACC TGCTGGATGC CGGCGGCGCC 
CTGTGGCGCA GCTACACGGC TCGCGATCAT CAATGGCGCC GGGAATATGA TGCGCTGCGC 
CGACTGAGCG CGGTCTGGCT CGCGAGCGGG ATGAGTCGTA CCGAACGCTG CACCGAGCGG 
CTGCGCTACG GTGACGATGC CGGGATCGAT GCCGTGACGG CCCGCCGTGC GAACCTGCGC 
GGACGGCTGG TCAGTCACTA CGATCCGGCA GGCCTGCGCG AGATCACGAG CTACAGCCTC 
GGCGGGATGA TCCGCGAAGA GCAGCGGCGC TTCTTGCAAC AACGCGACTG GTCCAGCGAC 
TGGCCGGCGA CGCCCGGAGC CGCCGCGGCC CACCTCGAAG AGCAGATCGA AACCAGCCGT 
TGGCAGTGTA CGGCGCTGGG CGACGAGTTG ATGTTGCTCG ATGCGGCCGG CCACCGGCAC 
CGCTGCGCCT GGCATGTGTC CGGGCGGCCT TCGGGCAGTT GGCTGCAGTT AAGCGGTGGC 
GCCGAGCAGG CAGTGGTGAG CGAGCTGTCT TACACCGCCG ACCATCAGCT GCTGCATGAA 
CAGGCCGGCA ACGGCGTCAC CAGCGACTTC GAGTACGACC CGCAGACCCG GCGCCTGAGT 
CGAGCCCAAA CGACCCGGAC CGCGTCCGGC CGTGCCGCGA CGGTGCTGCA GGACCTGCGC 
TATACCTACG ACCGGGTCGG CAACGTCACC CAACTGGCGG ACCAGGCCAC CCGGGTCAGA 
TACTTCCGCA ACCAGCGGGT GGCCGCGGTA CGCACGTACC AGTACGACTG GCTGTACCAG 
CTGGTGCGGG CCACCGGGCG CGAACAGGCG AATGCCGGCC AGGAGGGCGT GGCGCTGCCG 
CCCGTCGGTA ACCCGGACGC GCTGGTCAAC TACACGCGCA CCTTCGCGTA CGATGCAGCG 
GGCAACCTGA CGCGCACCGT CCACCGGGGG GCCACCCGGT ACGTGCTGGC GCTGGCGGTG 
TCGCGGAGCT CAAACCGTGC GGTGGCCGGC CGTCGGGTCG GCGCTGACGA CGTCGAGGCG 
CAGTTCGACG CGCAAGGCAA CCCGCATCGG CTCGGCAGCA ACCAGCCGCT CACCTGGTCG 
GCCGACAACC GACTGAGCCG TGCCGTGCAG CTGCCGCGTA CCGGTGGCGA GGACGACTCC 
GAAGCGTATG GTTACGGCGG CGATGGCCAA CGGGTGCGCA AGTGGTCCAG CCAGCAGGCC 
GGGGCGGTGA CGCACCGGCG CGAGGTCCGC TATCTGCCGG GGCTGGAGCG GCGCACCAAC 
ACGGCCACCG GCGAGGTGCT GGAGGTGGTG TCAAGCGCGG TCGCAGGCCG CACCGCGATG 
CGCTGCCTGC ACTGGCGCGC GAGCCGGCCC GGCGGCCTGG ACAACGACAT GCGGCGCTAT 
AGCGTGAATG ATCACCTGGG CTCGAGCGGC CTGGAACTGG ACCAGAGCGG GCAACGGTTG 
AGCGCCGAGG AATACTACCC GTACGGCGGC ACCGCGGTGT GGCTGCCCAA AAGCCAGGTG 
GAAGGCAACT ACAAGTTCGT GCGCCACGCG GGCAAGGAGC GCGACGTGAG CGGCCTGTAC 
GACTACGGCT ACCGCCATTA CGCGCCCTGG CTGGCGCGCT GGCTGAACCC CGACCCCGCC 
GGCACCGTCG ATGGACTGAA TCTCTATCGG ATGGTAAGGA ATAATCCGGT AACGCTGTGC 
GATACCGATG GCCGCAGGCC GGAGCGCAAG CAGATCATTG AAAACTATGC CCAGATAAAG 
CGGTTCCAAT ATTCTGCCGA ACTTTTGTCA AAGAACCTGG CTGCCAGCGA TGCCAAAATT 
ACCGGCAGGG CGTTGGCGAA TATCATAATT GACCTTGCCG CAATTGGTAT CAACTACGGC 
TTGGCACTGG TCGTTCCGCC TATCCCAGCG TTCCCGGGGC CGCTTGAGGG ACTTAGCGGA 
ACCATCGCCG GGGAACTCGC CAATCGTGCG CTCGCTGCAG CAGGCTCCAG CGATCTGAGT 
ACCACACTAT TCTCTGGGCA AAAAACGCAG ATGCTAACCG CCGCCGCGAT GGAGGTCGCC 
GAGTACGCTG TCGCCATAGC GCATTCAAAT ACTTTCCCAG CGGGTCCTGG CAACGTTCGA 
AACTACATTC GGAGCAACAT GATTACGCGC CACGTCGACC CGGCCAGCCA ATTGATCTGG 
GAAAGAGCCG CTGTCGCACA GCGGGCCTAC CATGCAGCCC GCAATGCCGT GAGCACGGTG 
GAGCGTCTGG AAGAAGAAGC GCGGAAACTG TTTGAGAATT TTGATGAAGG AGCAGGTGGT 
CAGATCAAGA TAAGTCCCAG GGATTACCTA CTCAACACGC TAACGGGCTA CGACACGCCA 
AAACTGATCA AACTGGCGAA GCCCCTCACT GCAGAGTCCA TCGCAAGCAG CGCGGCCTCA 
GCAAAAAAAG CGCTGGGCCA CTTAACGCAC GTCGCACGGG AGATCGGCTA TCCAGCGCTC 
TCATGGGGAA CAGAGCAAGC AGAATTGGCC GGGCCCAACC GGCGCTCGCC GCTTGCCTAT 
TGGACGGAAG GAGATATCGA TCGCATGCTG CCCTTCCGGC GGACTTCGTG GAGCTAG 

 

Protein sequence

MSPLPTTTPT PPLQVVTAAF PKGGGALPGL GQTLSPSGMS GAAQLSIALP LPPVRLAPAL 
ALTYHSQQGN GPFGLGVALT LPTLARQTSR GTPSYADGRD VFVFEGDELV PDAAGPTEVD 
NERLTRYHMR HEGRFDYLEL HQPLTPADAP APAWWRVWRA DGRCEVFGRC AAARTAVPGN 
PAQVLEWHLE ETVSPHGEHV YYSYAPREAE AARTQLACLK QVRFGNVRAD PAPWSTAQGF 
DPATERWLFA LVFDYGEHAD TPQGPAWAAS RPWRRRADPF SRFDGGFELR CERLCQRIVL 
FHQLAALGAE PVAVRALQLS HTETAYLTQL TGVRQHGYRQ TGGALEQAAL PPLALEYTRF 
DLGRADFRAL EAGLVGLNAG FYQVVDLYGE GVPGILYNDG QSYRYRRAKN VKRGDQGLDV 
EYEAAQSLSV PGGEMSAAAL MDITGDGILD AVRTEPGMAG FFTRDGDKGW QRFIPFAAFP 
SEFLHPRALL ADLSGDGLAD LALIGPSSVR LFVNRGHDGF APPRQIDHLG PDRLPVPPGG 
GQTLTAFADV LGSGQPHLVR VRHNEVTCWP NLGQGRFGAP RTLRLRLDPA ITAANFDPAR 
VWLADLDGSG AADLLYLDHR TLYVHRNQCG NRFARAQTLS LPAALQYTDL HQVSVADLYG 
NGTSVLIISR LHPQPAHWVC DFSRGLKPYL LAGLNDNMGA QTRLTYASSA HEWLDERRAD 
SQARCRLPFP VSVLKRLEQV DEINHNTLEQ TLQYRQGYYD GEERQFRGFG LILSTDMPSP 
LGAAQRDAAG TPYIPALQTR TWYYTGDPDS PGAVDGNVGG SSYNGDPLAA ALSPLRIERR 
DGQAIPLPPG TPERRVLLRA LRGRVRREEV YGLNPTTGQP QATPFRVMSL RYCVREWQPA 
TASGVPAVLL AFVLESLDYN YDQVSTDPQW QQTVALAVDT YGMVTKTVSL HYPRRAQVMP 
PIMPLPEAAH CSDAQQDTFL VTETRIRVTH LQEPKPNRAG WRLGLPVENR DEMLGRVAPP 
TSANRVYSYE ELTKADGPLA SATRTLARWQ QQIYADPSTG DPLPLAQATR EGLVCQVRTA 
ALSQAELRRS FEGLIPSQQL EPLLTQLEDE LVNQAGFVQG TAEDDKDYFW NPGLTATFAD 
LAGFYTVRYH TDPFGNRTTY ERDALTLAPT LLSNARFTAA WIDYDPWSLL PAQITDANGT 
VHEVSYDPFG RVHLSALKGS ERAFTDSLGE ARVGFGPLAG YRSSVKTVEA ALRDPTGALG 
NAAQAYFHAD HSWMGALTEA GLRAAGLPDS EVQAVWQILL QQRLITVEGY VQARLHQLAK 
AGTPVPGLSD TQSAAVHRAV AAVSRVPVHA ATLSAERYRD EHADDPVPRP TDPVIRIALA 
YVDGFGRPLQ GKIKAEGGLS AIVEDDGKLK LDTSGRPLQE RSEERWLTQG HVVYNAKGLP 
RQQYQPYYLN RPVHLTDPKL DQLSASDTLY YDAPGRLAQL TKADGNRRTS QYRPWYRIET 
DEMGAPVATV HDGRGLAVRT VQRPPPGAAT ADKVRITRHA YDAAGRLVSS SDPRFFDRQQ 
AGETTLAGNE RYRYGLSGSA VTRESRDAGW QVDLLDAGGA LWRSYTARDH QWRREYDALR 
RLSAVWLASG MSRTERCTER LRYGDDAGID AVTARRANLR GRLVSHYDPA GLREITSYSL 
GGMIREEQRR FLQQRDWSSD WPATPGAAAA HLEEQIETSR WQCTALGDEL MLLDAAGHRH 
RCAWHVSGRP SGSWLQLSGG AEQAVVSELS YTADHQLLHE QAGNGVTSDF EYDPQTRRLS 
RAQTTRTASG RAATVLQDLR YTYDRVGNVT QLADQATRVR YFRNQRVAAV RTYQYDWLYQ 
LVRATGREQA NAGQEGVALP PVGNPDALVN YTRTFAYDAA GNLTRTVHRG ATRYVLALAV 
SRSSNRAVAG RRVGADDVEA QFDAQGNPHR LGSNQPLTWS ADNRLSRAVQ LPRTGGEDDS 
EAYGYGGDGQ RVRKWSSQQA GAVTHRREVR YLPGLERRTN TATGEVLEVV SSAVAGRTAM 
RCLHWRASRP GGLDNDMRRY SVNDHLGSSG LELDQSGQRL SAEEYYPYGG TAVWLPKSQV 
EGNYKFVRHA GKERDVSGLY DYGYRHYAPW LARWLNPDPA GTVDGLNLYR MVRNNPVTLC 
DTDGRRPERK QIIENYAQIK RFQYSAELLS KNLAASDAKI TGRALANIII DLAAIGINYG 
LALVVPPIPA FPGPLEGLSG TIAGELANRA LAAAGSSDLS TTLFSGQKTQ MLTAAAMEVA 
EYAVAIAHSN TFPAGPGNVR NYIRSNMITR HVDPASQLIW ERAAVAQRAY HAARNAVSTV 
ERLEEEARKL FENFDEGAGG QIKISPRDYL LNTLTGYDTP KLIKLAKPLT AESIASSAAS 
AKKALGHLTH VAREIGYPAL SWGTEQAELA GPNRRSPLAY WTEGDIDRML PFRRTSWS