Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0171 |
Symbol | |
ID | 3692641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 241315 |
End bp | 242073 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637730425 |
Product | hypothetical protein |
Protein accession | YP_335330 |
Protein GI | 76818825 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000176757 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGAAG ATCTGGGAAG GAACGTCGAC AACGTCCGTG TTAATGTTGG CCGTGGCGGG TTCGATAGTG GATATGGATG GGGGTGTGGT CCAGGCGGCT ATGGAGGGGG GCTAGCCGCG GCTGTGGGAG CGGCGATTGG TGCGGCGCTG TTTCGGCGCT TCGGTTTCGG CGACGGTGAC GGTGGTGCGG CAGTCAACCA GCTTACCGAT GACATGTTGC TCTCGAAGTT GGGCAACATT GAAGGTCAGA TCGGCATCTC GACTGGTCAG ATCCAGAACG GCCTGTTGCA GCAAACGCTT GCATTGAACG GAAGCCTCTC AGGTGTCAAG GATGCCGTGA CCAATTCTGG TTTCATGAAC CTGCAGGCCA CCAATGGCGT AGCACAAGCG GTGCAGTCGG TGGGATGTTC CATCAAAGAA GCCGTTCGTG GTGATGGCGA AGCGACGCGG GCCCTAATCA GCGCGCAGTT CCAGGCGCAG CAGTCGGAAA AGATCAACGC ACTGGCGGCC GAAGTCATCG AACTGCGGAA CGAAGGCCGT ATGCAGAAGC AAACGCATGA CATCAACCTG AACGTCACAA ACCTGCAGAA CCAGATCAGT AACCAGGCCC AGGCCAACAC GCAAGTCACC CTGGACCGGC TTGCCACTGG GCTTGCCGCG CTTACGAGCC AAGTAAGCCG TCAGAGCGAG GTAATCTTCA ACTCGGGGAC AATGGCTGCA AGCGGCAACC AGAGGTTGTC GCAAACGAAC GTGGGCTGA
|
Protein sequence | MSEDLGRNVD NVRVNVGRGG FDSGYGWGCG PGGYGGGLAA AVGAAIGAAL FRRFGFGDGD GGAAVNQLTD DMLLSKLGNI EGQIGISTGQ IQNGLLQQTL ALNGSLSGVK DAVTNSGFMN LQATNGVAQA VQSVGCSIKE AVRGDGEATR ALISAQFQAQ QSEKINALAA EVIELRNEGR MQKQTHDINL NVTNLQNQIS NQAQANTQVT LDRLATGLAA LTSQVSRQSE VIFNSGTMAA SGNQRLSQTN VG
|
| |