Gene BURPS1710b_A0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0165 
Symboltnp17 
ID3694006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand- 
Start bp232772 
End bp233410 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID637730419 
ProductIS4 family transposase 
Protein accessionYP_335324 
Protein GI76817844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0055531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTCGC GTCACGGCGT GAAGGCGCGC CAAGTGCGTC AGCACGTATG GTTGCGGCGC 
ATCGAACTGC CGGCAGGCAT TGGTCAAAGC GTAGCGGCCA CGTGTCTGGT GGCGCGTGAG 
TTTGACGCAC CAAGCGGCGT CAAGCCGATC GAATGGCGCT TGCTGACCAA CCGCGAAGCC 
ACGACGCTGC CGGAAGCGAT TGAACTGATC GACTGGTATC GGGCGCGCTG GGAAATCGAG 
ATCTTGTTCA ACGTGCTGAA GAACGGCTGC CGAGTCGAGG CGTTGCAATT GGGCACGATT 
GAGCGACTTG AGCGCGCGTT GGCACTGCTT CTGGTGGTGG CGTGGCGAAT CACCCATCTA 
ATGCGCCTGG GCCGCAGTTG CCCCGATCTC GATGCCGAAC TGTTCTTCGA TGCCGATGAA 
ATTCGTGGCG CGTATTTGCT CACCGACGTC AAGCAGTCGG TCCAGTCCAA GCTCAACGAG 
GTGCTGCGCT TGATCGCGCG CCTGGGCGGA TTCCTTGGCT GCAAGGGCGA CGGCGAACCC 
GGCGCGAAAG CCATCTGGCT CGGACTCAAA GAGGTTCATG TCGCCGCCAA GACATTGCAA 
AAGTTACGTG CCGGCGGTCA CGCCGACAAT TGTGTATAA
 
Protein sequence
MGSRHGVKAR QVRQHVWLRR IELPAGIGQS VAATCLVARE FDAPSGVKPI EWRLLTNREA 
TTLPEAIELI DWYRARWEIE ILFNVLKNGC RVEALQLGTI ERLERALALL LVVAWRITHL 
MRLGRSCPDL DAELFFDADE IRGAYLLTDV KQSVQSKLNE VLRLIARLGG FLGCKGDGEP 
GAKAIWLGLK EVHVAAKTLQ KLRAGGHADN CV