Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0159 |
Symbol | tcdB2 |
ID | 3693550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 204784 |
End bp | 212037 |
Gene Length | 7254 bp |
Protein Length | 2417 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637730413 |
Product | insecticidal toxin complex protein TcdB2 |
Protein accession | YP_335318 |
Protein GI | 76818135 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.163635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCGC TGCCCACCAC CACGCCGACA CCGCCGCTGC AGGTCGTCAC CGCCGCGTTC CCGAAGGGCG GCGGCGCCCT GCCGGGGCTG GGCCAAACCC TGAGCCCGAG CGGGATGAGC GGCGCCGCGC AGCTGTCGAT CGCCTTGCCG CTGCCGCCGG TGCGGCTCGC CCCCGCGCTT GCCCTGACGT ACCACAGCCA ACAGGGCAAC GGCCCGTTCG GGTTGGGGGT GGCACTGACG CTGCCGACGC TTGCCCGCCA GACCAGCCGC GGCACGCCCA GCTACGCGGA CGGACGCGAT GTCTTCGTGT TCGAGGGCGA TGAACTGGTA CCGGACGCGG CCGGGCCGAC GGAGGTGGAC AACGAGCGTC TCACCCGCTA CCACATGCGC CACGAGGGAC GGTTCGACTA CCTCGAGCTG CATCAGCCGC TTACGCCCGC CGATGCGCCC GCCCCCGCCT GGTGGCGGGT GTGGCGTGCC GACGGCCGGT GCGAGGTGTT CGGCCGCTGC GCGGCCGCCC GCACCGCGGT CCCCGGCAAC CCGGCGCAGG TGCTTGAATG GCATCTTGAG GAAACGGTGA GTCCGCACGG CGAACATGTG TACTACAGCT ACGCGCCCCG CGAAGCGGAG GCAGCTCGCA CGCAGCTCGC GTGCCTCAAG CAGGTGCGCT TCGGCAATGT GCGTGCGGAT CCGGCGCCGT GGTCGACCGC GCAAGGCTTC GACCCGGCCA CCGAGCGCTG GCTGTTCGCG CTGGTGTTCG ACTACGGCGA ACATGCCGAC ACGCCGCAGG GGCCGGCCTG GGCCGCGAGC CGGCCATGGC GTCGCCGCGC CGACCCGTTC TCGCGCTTCG ATGGCGGCTT CGAGCTGCGC TGCGAGCGGC TGTGCCAGCG CATCGTATTG TTTCACCAGC TCGCCGCGCT GGGTGCCGAA CCGGTGGCGG TGCGCGCGCT GCAGCTCAGC CACACGGAAA CCGCGTACCT GACCCAGCTG ACCGGCGTGC GCCAGCACGG TTATCGGCAA ACCGGCGGAG CGCTCGAGCA GGCCGCGCTG CCGCCGCTGG CGCTGGAGTA CACGAGGTTC GACCTGGGCC GCGCGGACTT CCGTGCGCTC GAGGCGGGGC TGGTTGGGCT CAATGCGGGC TTCTATCAGG TGGTCGACCT CTACGGCGAG GGCGTGCCCG GGATTCTGTA CAACGACGGC CAGAGCTACC GGTACCGCCG CGCCAAAAAT GTCAAGCGCG GTGACCAGGG GCTGGACGTC GAGTACGAGG CGGCGCAGTC ACTGAGCGTA CCCGGTGGCG AGATGAGCGC CGCAGCCTTG ATGGACATCA CCGGCGACGG CATCCTCGAT GCCGTGCGCA CCGAGCCGGG CATGGCCGGC TTCTTTACGC GCGACGGTGA CAAAGGCTGG CAGCGCTTCA TCCCGTTTGC CGCCTTCCCG AGTGAGTTCC TCCATCCCCG GGCGTTGCTC GCCGACCTGA GCGGCGACGG CCTGGCGGAC CTGGCGCTGA TCGGTCCCAG CAGTGTGCGC TTGTTCGTCA ATCGGGGCCA CGACGGCTTT GCTCCGCCGC GCCAGATCGA CCACCTCGGC CCGGACCGCC TGCCGGTGCC CCCGGGCGGC GGCCAGACCC TGACGGCCTT CGCCGACGTG CTCGGCAGCG GCCAGCCGCA CCTGGTGCGG GTTCGCCATA ACGAGGTGAC CTGCTGGCCC AATCTGGGCC AGGGCCGCTT CGGCGCGCCG CGCACCCTGC GACTGCGCCT GGATCCCGCG ATTACCGCGG CGAACTTCGA TCCCGCCCGC GTATGGCTGG CCGATCTCGA TGGCAGCGGC GCGGCCGACC TGCTGTATCT CGATCACCGC ACGCTTTACG TGCACCGCAA CCAGTGCGGC AATCGTTTCG CCAGGGCCCA GACGCTGAGC TTGCCGGCTG CGCTGCAGTA CACCGACCTG CACCAGGTGA GCGTGGCCGA CCTGTACGGC AACGGCACCA GCGTGCTGAT CATCAGCCGG CTCCATCCGC AGCCGGCACA CTGGGTGTGC GACTTCTCGC GCGGGCTCAA GCCCTATCTG TTGGCGGGGC TGAACGACAA CATGGGAGCC CAGACGCGCC TGACCTACGC CAGCTCCGCA CACGAATGGC TCGACGAGCG TCGTGCCGAT TCGCAGGCGC GTTGTCGCCT GCCGTTTCCG GTGTCGGTAC TCAAGCGGCT GGAGCAGGTC GACGAGATCA ATCACAACAC GCTGGAGCAG ACTCTTCAAT ACCGGCAGGG TTACTACGAT GGCGAGGAGC GCCAGTTCCG CGGCTTCGGA TTGATCCTGA GCACGGACAT GCCCAGCCCC TTGGGTGCCG CGCAGCGCGA CGCGGCCGGC ACCCCTTATA TTCCAGCGCT GCAGACGCGG ACCTGGTACT ACACCGGCGA CCCTGACAGT CCTGGCGCCG TGGACGGCAA CGTGGGCGGT TCCTCGTACA ACGGCGACCC GCTCGCGGCA GCCCTGTCGC CGCTGCGGAT CGAGAGGCGG GACGGTCAGG CCATCCCGTT GCCGCCGGGC ACGCCGGAGC GGCGCGTGCT TCTGCGGGCA CTGCGTGGCC GGGTGCGACG CGAGGAGGTG TACGGGCTGA ATCCAACCAC CGGCCAGCCC CAGGCCACGC CGTTCCGTGT GATGAGCCTG CGGTACTGCG TGCGGGAATG GCAACCGGCC ACTGCCTCGG GAGTGCCCGC CGTGCTGCTG GCGTTCGTGC TGGAAAGCCT AGATTACAAC TATGATCAGG TGTCTACCGA CCCGCAATGG CAGCAGACCG TGGCGCTGGC GGTGGACACG TACGGCATGG TCACGAAGAC CGTCAGCCTG CACTATCCGC GCCGTGCGCA AGTGATGCCG CCGATCATGC CATTGCCCGA GGCGGCCCAT TGCAGCGATG CGCAGCAGGA CACGTTCCTG GTCACGGAAA CCCGGATCCG CGTGACCCAT CTACAAGAAC CGAAACCGAA CCGAGCTGGC TGGCGACTGG GCCTGCCGGT CGAAAACCGG GACGAGATGC TCGGCCGGGT CGCCCCGCCG ACTTCCGCCA ACCGTGTCTA CAGCTATGAG GAGCTGACCA AGGCCGACGG TCCGCTGGCG AGCGCGACTC GCACCCTGGC CCGCTGGCAA CAGCAAATCT ATGCGGATCC GTCGACGGGT GACCCGCTCC CGCTGGCGCA GGCCACCCGC GAAGGGCTCG TTTGCCAGGT GCGCACGGCC GCCTTGAGCC AAGCCGAGTT GCGGAGGAGC TTTGAAGGCC TGATTCCGTC ACAGCAACTG GAACCGCTAC TCACGCAACT GGAAGACGAA CTGGTCAATC AAGCGGGATT CGTGCAGGGT ACGGCTGAGG ATGATAAGGA CTACTTCTGG AACCCTGGTC TGACTGCGAC ATTCGCAGAC TTGGCGGGGT TCTATACGGT GCGCTACCAC ACCGACCCGT TCGGCAACCG GACCACCTAC GAGCGCGACG CACTCACCCT CGCGCCCACC CTACTCAGCA ATGCACGGTT CACTGCGGCC TGGATCGACT ACGACCCTTG GAGCCTGCTG CCGGCCCAGA TCACCGACGC TAATGGGACG GTGCATGAAG TGAGCTATGA CCCGTTCGGC CGGGTACACC TGAGTGCGCT GAAAGGCAGC GAGCGCGCCT TCACCGACAG TCTGGGCGAG GCTCGAGTGG GCTTCGGTCC GCTGGCCGGC TACCGCTCGT CGGTCAAGAC GGTCGAAGCG GCCCTACGGG ATCCGACCGG CGCCCTCGGC AACGCCGCTC AGGCCTATTT CCATGCTGAT CACAGCTGGA TGGGCGCGCT GACCGAGGCC GGACTGCGCG CGGCAGGGCT GCCGGACAGC GAGGTTCAGG CCGTCTGGCA AATCTTGCTC CAGCAGCGCC TGATCACCGT GGAAGGCTAT GTCCAGGCTC GGCTGCATCA ACTCGCCAAG GCCGGCACGC CGGTGCCGGG GCTGAGCGAC ACCCAGAGCG CCGCCGTGCA TCGGGCCGTG GCCGCAGTGT CCCGGGTGCC GGTGCACGCG GCCACCCTGA GTGCCGAGCG CTACCGGGAT GAGCATGCTG ACGACCCGGT GCCGCGCCCA ACGGATCCCG TGATCCGGAT CGCCCTGGCC TATGTGGACG GGTTCGGGCG GCCGCTGCAG GGCAAGATCA AAGCGGAGGG CGGACTCAGT GCGATCGTCG AGGACGACGG CAAGCTCAAG CTCGATACCA GCGGCCGGCC GCTGCAGGAG CGCAGCGAGG AGCGCTGGCT GACCCAGGGT CACGTGGTGT ACAACGCCAA GGGGCTGCCC CGTCAGCAAT ACCAGCCGTA CTACCTGAAC CGGCCGGTCC ATCTCACCGA CCCGAAGCTG GACCAGCTGA GCGCGAGCGA CACGCTGTAT TACGACGCGC CGGGCCGGTT GGCGCAACTC ACCAAGGCCG ACGGCAACCG GCGCACGAGC CAGTACCGGC CGTGGTACCG GATCGAGACG GATGAAATGG GTGCGCCGGT CGCCACGGTC CATGACGGGC GCGGCCTGGC GGTGCGCACG GTCCAACGTC CCCCGCCCGG CGCCGCCACC GCGGACAAAG TCCGCATCAC CCGCCACGCG TACGACGCCG CCGGGCGGCT CGTCTCGAGC AGCGACCCGC GCTTCTTCGA TCGGCAGCAG GCCGGTGAGA CGACACTCGC CGGCAACGAA CGCTACCGCT ATGGGCTGTC GGGCTCTGCC GTGACCCGCG AGAGCCGCGA CGCCGGCTGG CAGGTCGACC TGCTGGATGC CGGCGGCGCC CTGTGGCGCA GCTACACGGC TCGCGATCAT CAATGGCGCC GGGAATATGA TGCGCTGCGC CGACTGAGCG CGGTCTGGCT CGCGAGCGGG ATGAGTCGTA CCGAACGCTG CACCGAGCGG CTGCGCTACG GTGACGATGC CGGGATCGAT GCCGTGACGG CCCGCCGTGC GAACCTGCGC GGACGGCTGG TCAGTCACTA CGATCCGGCA GGCCTGCGCG AGATCACGAG CTACAGCCTC GGCGGGATGA TCCGCGAAGA GCAGCGGCGC TTCTTGCAAC AACGCGACTG GTCCAGCGAC TGGCCGGCGA CGCCCGGAGC CGCCGCGGCC CACCTCGAAG AGCAGATCGA AACCAGCCGT TGGCAGTGTA CGGCGCTGGG CGACGAGTTG ATGTTGCTCG ATGCGGCCGG CCACCGGCAC CGCTGCGCCT GGCATGTGTC CGGGCGGCCT TCGGGCAGTT GGCTGCAGTT AAGCGGTGGC GCCGAGCAGG CAGTGGTGAG CGAGCTGTCT TACACCGCCG ACCATCAGCT GCTGCATGAA CAGGCCGGCA ACGGCGTCAC CAGCGACTTC GAGTACGACC CGCAGACCCG GCGCCTGAGT CGAGCCCAAA CGACCCGGAC CGCGTCCGGC CGTGCCGCGA CGGTGCTGCA GGACCTGCGC TATACCTACG ACCGGGTCGG CAACGTCACC CAACTGGCGG ACCAGGCCAC CCGGGTCAGA TACTTCCGCA ACCAGCGGGT GGCCGCGGTA CGCACGTACC AGTACGACTG GCTGTACCAG CTGGTGCGGG CCACCGGGCG CGAACAGGCG AATGCCGGCC AGGAGGGCGT GGCGCTGCCG CCCGTCGGTA ACCCGGACGC GCTGGTCAAC TACACGCGCA CCTTCGCGTA CGATGCAGCG GGCAACCTGA CGCGCACCGT CCACCGGGGG GCCACCCGGT ACGTGCTGGC GCTGGCGGTG TCGCGGAGCT CAAACCGTGC GGTGGCCGGC CGTCGGGTCG GCGCTGACGA CGTCGAGGCG CAGTTCGACG CGCAAGGCAA CCCGCATCGG CTCGGCAGCA ACCAGCCGCT CACCTGGTCG GCCGACAACC GACTGAGCCG TGCCGTGCAG CTGCCGCGTA CCGGTGGCGA GGACGACTCC GAAGCGTATG GTTACGGCGG CGATGGCCAA CGGGTGCGCA AGTGGTCCAG CCAGCAGGCC GGGGCGGTGA CGCACCGGCG CGAGGTCCGC TATCTGCCGG GGCTGGAGCG GCGCACCAAC ACGGCCACCG GCGAGGTGCT GGAGGTGGTG TCAAGCGCGG TCGCAGGCCG CACCGCGATG CGCTGCCTGC ACTGGCGCGC GAGCCGGCCC GGCGGCCTGG ACAACGACAT GCGGCGCTAT AGCGTGAATG ATCACCTGGG CTCGAGCGGC CTGGAACTGG ACCAGAGCGG GCAACGGTTG AGCGCCGAGG AATACTACCC GTACGGCGGC ACCGCGGTGT GGCTGCCCAA AAGCCAGGTG GAAGGCAACT ACAAGTTCGT GCGCCACGCG GGCAAGGAGC GCGACGTGAG CGGCCTGTAC GACTACGGCT ACCGCCATTA CGCGCCCTGG CTGGCGCGCT GGCTGAACCC CGACCCCGCC GGCACCGTCG ATGGACTGAA TCTCTATCGG ATGGTAAGGA ATAATCCGGT GACGTTCATC GATCGGGACG GAATAGCTGC AACCCGACTG AACTGGCTGG ACCTAGCGCC GGCTCCGAGT CCGGCTGCCG TGGCGGTCGC TTCCAGAAAG CTGGACTCCC GGCATACCTC GTTCCCTCCG ACAACAGGGT TGATTCAAAA TGTAAAGGTA AAAAATGAAG CGCTGATTGG TCAAGTGTTG GCGAGTCATC TTGAGGCGAG TCGAGGTTTG TCTGCGCCGA TTGAGGCCAA AAAGTTTCCG CAATTGGAAC TTCCACCCGA CATGATATTT CGATTGGGTA GAATCGACGA AGACAGTTAT CTTTTGTTCC CCACTGCCGC AGGGAAAGTT CAAAAAATCC CCTACGGAAC ATTATCATAT GTGATTAGAT ATGAGGATCC TCTATCCATT TATGTCTTCG AGCACTCAGA GCTAGCGGAG AGAAAGGATT TAACCGAAAA AGTTATTCCC AGACTAGCAA ACTATGGGCA CTCGTCACTG ACGTATAAAG AGGATAAGCC CAACATGTTC GACCGGAGCA TTCCCAAAGC AGAACGCTTC AGACAAAGTG CAAAGCCTGT CCTGCTTGCC GGCAACCTGA ACTTCGAAAT GGCGGAGTAC CCTCAGCTCG GTGCCGGGCG ATTAATATCC TGGTCGGTTG AAAGTGGACA TTTCCAACCG ACCGACAAGG ATGCAGTTAA GAATCGCATA GGTTTTATTC AGCAGCTACT CCCTATTGGA AAGTTTAACC GGATCGACTG GGAGGAGAAA AGGAAGCAGA TCCAGCGTCC ATAG
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Protein sequence | MSPLPTTTPT PPLQVVTAAF PKGGGALPGL GQTLSPSGMS GAAQLSIALP LPPVRLAPAL ALTYHSQQGN GPFGLGVALT LPTLARQTSR GTPSYADGRD VFVFEGDELV PDAAGPTEVD NERLTRYHMR HEGRFDYLEL HQPLTPADAP APAWWRVWRA DGRCEVFGRC AAARTAVPGN PAQVLEWHLE ETVSPHGEHV YYSYAPREAE AARTQLACLK QVRFGNVRAD PAPWSTAQGF DPATERWLFA LVFDYGEHAD TPQGPAWAAS RPWRRRADPF SRFDGGFELR CERLCQRIVL FHQLAALGAE PVAVRALQLS HTETAYLTQL TGVRQHGYRQ TGGALEQAAL PPLALEYTRF DLGRADFRAL EAGLVGLNAG FYQVVDLYGE GVPGILYNDG QSYRYRRAKN VKRGDQGLDV EYEAAQSLSV PGGEMSAAAL MDITGDGILD AVRTEPGMAG FFTRDGDKGW QRFIPFAAFP SEFLHPRALL ADLSGDGLAD LALIGPSSVR LFVNRGHDGF APPRQIDHLG PDRLPVPPGG GQTLTAFADV LGSGQPHLVR VRHNEVTCWP NLGQGRFGAP RTLRLRLDPA ITAANFDPAR VWLADLDGSG AADLLYLDHR TLYVHRNQCG NRFARAQTLS LPAALQYTDL HQVSVADLYG NGTSVLIISR LHPQPAHWVC DFSRGLKPYL LAGLNDNMGA QTRLTYASSA HEWLDERRAD SQARCRLPFP VSVLKRLEQV DEINHNTLEQ TLQYRQGYYD GEERQFRGFG LILSTDMPSP LGAAQRDAAG TPYIPALQTR TWYYTGDPDS PGAVDGNVGG SSYNGDPLAA ALSPLRIERR DGQAIPLPPG TPERRVLLRA LRGRVRREEV YGLNPTTGQP QATPFRVMSL RYCVREWQPA TASGVPAVLL AFVLESLDYN YDQVSTDPQW QQTVALAVDT YGMVTKTVSL HYPRRAQVMP PIMPLPEAAH CSDAQQDTFL VTETRIRVTH LQEPKPNRAG WRLGLPVENR DEMLGRVAPP TSANRVYSYE ELTKADGPLA SATRTLARWQ QQIYADPSTG DPLPLAQATR EGLVCQVRTA ALSQAELRRS FEGLIPSQQL EPLLTQLEDE LVNQAGFVQG TAEDDKDYFW NPGLTATFAD LAGFYTVRYH TDPFGNRTTY ERDALTLAPT LLSNARFTAA WIDYDPWSLL PAQITDANGT VHEVSYDPFG RVHLSALKGS ERAFTDSLGE ARVGFGPLAG YRSSVKTVEA ALRDPTGALG NAAQAYFHAD HSWMGALTEA GLRAAGLPDS EVQAVWQILL QQRLITVEGY VQARLHQLAK AGTPVPGLSD TQSAAVHRAV AAVSRVPVHA ATLSAERYRD EHADDPVPRP TDPVIRIALA YVDGFGRPLQ GKIKAEGGLS AIVEDDGKLK LDTSGRPLQE RSEERWLTQG HVVYNAKGLP RQQYQPYYLN RPVHLTDPKL DQLSASDTLY YDAPGRLAQL TKADGNRRTS QYRPWYRIET DEMGAPVATV HDGRGLAVRT VQRPPPGAAT ADKVRITRHA YDAAGRLVSS SDPRFFDRQQ AGETTLAGNE RYRYGLSGSA VTRESRDAGW QVDLLDAGGA LWRSYTARDH QWRREYDALR RLSAVWLASG MSRTERCTER LRYGDDAGID AVTARRANLR GRLVSHYDPA GLREITSYSL GGMIREEQRR FLQQRDWSSD WPATPGAAAA HLEEQIETSR WQCTALGDEL MLLDAAGHRH RCAWHVSGRP SGSWLQLSGG AEQAVVSELS YTADHQLLHE QAGNGVTSDF EYDPQTRRLS RAQTTRTASG RAATVLQDLR YTYDRVGNVT QLADQATRVR YFRNQRVAAV RTYQYDWLYQ LVRATGREQA NAGQEGVALP PVGNPDALVN YTRTFAYDAA GNLTRTVHRG ATRYVLALAV SRSSNRAVAG RRVGADDVEA QFDAQGNPHR LGSNQPLTWS ADNRLSRAVQ LPRTGGEDDS EAYGYGGDGQ RVRKWSSQQA GAVTHRREVR YLPGLERRTN TATGEVLEVV SSAVAGRTAM RCLHWRASRP GGLDNDMRRY SVNDHLGSSG LELDQSGQRL SAEEYYPYGG TAVWLPKSQV EGNYKFVRHA GKERDVSGLY DYGYRHYAPW LARWLNPDPA GTVDGLNLYR MVRNNPVTFI DRDGIAATRL NWLDLAPAPS PAAVAVASRK LDSRHTSFPP TTGLIQNVKV KNEALIGQVL ASHLEASRGL SAPIEAKKFP QLELPPDMIF RLGRIDEDSY LLFPTAAGKV QKIPYGTLSY VIRYEDPLSI YVFEHSELAE RKDLTEKVIP RLANYGHSSL TYKEDKPNMF DRSIPKAERF RQSAKPVLLA GNLNFEMAEY PQLGAGRLIS WSVESGHFQP TDKDAVKNRI GFIQQLLPIG KFNRIDWEEK RKQIQRP
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