Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0142 |
Symbol | |
ID | 3693864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 188602 |
End bp | 189306 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637730396 |
Product | N-acyl-homoserine lactone dependent regulatory protein |
Protein accession | YP_335301 |
Protein GI | 76817623 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0163426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGACT TTCTTCAATT TTGGCTAAAC GAATTTTCAC GCAGTGAGAA CCCACAGCAC GTCATTTCCG TCTTGACCCG CGCGGCCGCG ACGCTCGGCT ACGAATACGC CGCCTACGGC ATGCGCCGCC CCTTTCCGAT CAGCAATCCG CCGATCCTCA TGGTGTCCAA CTATCCCGCC CGATGGCAGG AACGCTATAT CGAAGCGCGA TTTGCGAACA TCGACGGCGC GGTGAAGGCC GCGCTCGGCA GCGACCGGCC CGTGACCTGG AGCGCGCCCG CCAACGCATC GAAAAGCGCA TTCTGGGCGG AGGCGCTGTC GTTCGGCATC GCCCACGGCT GGTCGTCCGC GTCGCGGGGC GCGGACGGCG CGATCGGCGT GCTGACGCTG TCGAGAACGC AGGACCCGAT CGACACCGCG GAGAAGTTTC GCAACGAGAG CATCGTGCAC TGGCTCGCCA ATGTCGCTCA TGCGTCGATG GCGCCGTTCC TGCCCGCCGC CGACGAGTTC GATCCGGACC TCACGCGCCG CGAGACCGAT GTGCTGAAAT GGACGGCCGA CGGAAAGACA GCGTACGAAA TCGCGCTGAT TCTCAGCATC TCGGAGAGCA CCGTCAATTT TCACGTGAAG AATATCGTCT CCAAGCTGGG CTCCACGAAC AAGATACAGG CCGTGGCCAA GGCCGCGCTG ATGGGGATGC TGTGA
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Protein sequence | MHDFLQFWLN EFSRSENPQH VISVLTRAAA TLGYEYAAYG MRRPFPISNP PILMVSNYPA RWQERYIEAR FANIDGAVKA ALGSDRPVTW SAPANASKSA FWAEALSFGI AHGWSSASRG ADGAIGVLTL SRTQDPIDTA EKFRNESIVH WLANVAHASM APFLPAADEF DPDLTRRETD VLKWTADGKT AYEIALILSI SESTVNFHVK NIVSKLGSTN KIQAVAKAAL MGML
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