Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0141 |
Symbol | prlC |
ID | 3692121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 185972 |
End bp | 188041 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637730395 |
Product | oligopeptidase A |
Protein accession | YP_335300 |
Protein GI | 76819768 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0166271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCAGA TAACATTAGC CAATCCCCTT CTGGATCGTT CTCAATTACC CCGCTTTGAA TCAATTCGCG ATTTCCATGT ACGCCCCGCC ATCGACGCGC TTCTGATTGA TCTCGATAAC GCGATATCGC GTGCCAGCGC AAAAAATTTG TCGCCGAATT GGGGCAATGC GATTGAGCCG GTGAGTCTCG CGCTCGAATC GCTCGACTAT GCGTGGGGCG CCGTCGCGCA TCTCGTATCG GTGCGCGATT GCGCGCCGTT GCGCGCCGCG TACGGAGCGT GCGCGGGACG GGTGTCGGCG GCGCTGTCGC GCTTTCGGCA AAACGGCGCG CTGCTCGATC GCTATCGCGC GGTTGCCGCG TCGGCGGGCT TTCGCGCCCT CTCGCCCGAG CGGCGCCAGG TCGTGCGCAA CCTGATACGC GACGCCCGGC TCGCCGGTGC CGAATTGCCG CCGGGCCCGA GAGCGCGGCT GAACGAGCTG CGCGAGCGCA TCGCGCAGCT CGCCGCCGTG TACCAGGACA ACATCGCGGA CGCCACCCGC GCGTTCGCGC GCATCGTGAC GACAGACGAG GAACTCGACG GCATCCCCGA CTACGCGCGC GCGGCGGCCG CCCGACGCGC GGCCGCGGGC TTCGAATTCA CACTGGATTT CGCGTCCTAC CAGCCGGTCA TGCAGTTCTC GACGTGCCGC GCGTTGCGCG AGGAAATGTA TCGGGCGCGC TCGACTCGCG CGTCGGAATT CGACGCGGCG GGCGCGAACG ACGCCGCGCG GCGGGACAAC GCGCCCGTCA TGGCGGAAAT TCTGAAACTG CGGCGCGAGC AAGCCGCGCT GCTCGGCTAT CGCGATTTCG CCCAGATGTC GCTCGAGCAC AAGATGGCGC GCACCCCGGC GCGCGCGCGC GCGTTTCTCG AGCGCCTTCA TCGGCGAGTG AGCCCGAAGG CGAGCCTCGA GTGGCAGGCG CTGCAATCGT TCGCGCGCGC CGAGCTGGGC CTCGCCGACG TGCAGCCGTG GGACATCGCG TTCGTCGCCG AGCGCATGCG CGAGCGGTGC TTCGGGGTTT CGACGCAGGA CGTTCGCCGC TATTTCCCCG AACACGCGGT GCTGCGCGGG CTATTCGCGC TCGTCGAAAC GCTGTTCGAC ATCCGGATCC GCGCCGACGA AGGCAGCGTG TGGCATCAGG ACGTGCGCCG ATACCGGCTC GAGACCCTGC GCGGCGAACC CGTCGCGCAT CTCTACCTCG ATCTGTATGC GCGCGACGGA AAACGCGAAG GCGCGTGGGC GGCGAGCGGC CGCTCGCGCG GCACCGGCGC CGACGGCGCG ATACGCACCC CCGTCGCCTA TCTGATGTGC AACGTGGCCG CGCCCGCCGC CGGCATGCCC GCGTGCTTCG CGTTCGATCA GGTCGTGACG CTGTTCCATG AAATGGGCCA CTGTCTCCAT CATATGCTGA CCGGCGTGGC CGAAAGCGCG ATATCCGGCA CGAACGGCAT CGAATGGGAT GCAATCGAAT TTCCGTCGCA ATTCATGGAG CACTTCTGCT GGGATCCGGA GGTCGTTTCC ACGCTCAGCG CCCATGTCGA CACCGGCGAG CCATTACCGG ACGCGATGTT CGAGCGCATG CTCGCGGCGC GTCATTTCAA CCAGGGCATT GAAATGGCCC ATCAGATCGC GCTGTCGATG CTCGATATCG CTTTGCATTC CGGCGAATCA ATAGAATCAG TCAATTCAAT GCAAAACACG ATGCATGAAA TTTATCAAAA ATATGAATTT ACGCCGCTAG ATCGGCGGGC GCGAAGCGCG AACACATTCA GCCACATCTT CTCCGGCGGT TATGCGGCGG CCTATTACAG CTATCAATGG GCGCAGGTGC TCGCGGCCGA TGCGTATGCG GCCGTCGAGG AAGCCCGCGC CGAGCACGCG GACGCGGGCA AGCGCGAAGC CGGCATGCGC TATCGGAAGG AAGTGCTCGA GCCGGGCGGC AGCCGGCCCG CGCTCGATTC GTTCGTCGCC TTCCGTGGCC GCGCGCCGAG CCTCGACGCG CTGCTGCGGC ACTGCCGGAT AGACCGCTAG
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Protein sequence | MTQITLANPL LDRSQLPRFE SIRDFHVRPA IDALLIDLDN AISRASAKNL SPNWGNAIEP VSLALESLDY AWGAVAHLVS VRDCAPLRAA YGACAGRVSA ALSRFRQNGA LLDRYRAVAA SAGFRALSPE RRQVVRNLIR DARLAGAELP PGPRARLNEL RERIAQLAAV YQDNIADATR AFARIVTTDE ELDGIPDYAR AAAARRAAAG FEFTLDFASY QPVMQFSTCR ALREEMYRAR STRASEFDAA GANDAARRDN APVMAEILKL RREQAALLGY RDFAQMSLEH KMARTPARAR AFLERLHRRV SPKASLEWQA LQSFARAELG LADVQPWDIA FVAERMRERC FGVSTQDVRR YFPEHAVLRG LFALVETLFD IRIRADEGSV WHQDVRRYRL ETLRGEPVAH LYLDLYARDG KREGAWAASG RSRGTGADGA IRTPVAYLMC NVAAPAAGMP ACFAFDQVVT LFHEMGHCLH HMLTGVAESA ISGTNGIEWD AIEFPSQFME HFCWDPEVVS TLSAHVDTGE PLPDAMFERM LAARHFNQGI EMAHQIALSM LDIALHSGES IESVNSMQNT MHEIYQKYEF TPLDRRARSA NTFSHIFSGG YAAAYYSYQW AQVLAADAYA AVEEARAEHA DAGKREAGMR YRKEVLEPGG SRPALDSFVA FRGRAPSLDA LLRHCRIDR
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