| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0138 |
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| Symbol | |
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| ID | 3692282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 172591 |
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| End bp | 176652 |
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| Gene Length | 4062 bp |
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| Protein Length | 1353 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637730392 |
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| Product | TubD protein |
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| Protein accession | YP_335297 |
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| Protein GI | 76819302 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCGC GCATGCGGAT CGGCGTCGCC GCCACTACTA CCAAAGCAGA AAACACAGCA
TGGAGTCGAA AAGTGAATAA TCTTGACGTC GCGATCATCG GGATGAGCGG TGCGTTTCCG
GGCGCCTCCG ATGTCCGGGA ATTCTGGCGC AATCTCGAGG CCGGCCGTTG TTCGCTGGAG
CGCTACACCG AGCAGGAACT GCTCGACGCC GGCGTCGATC CCGCGCATCT GAAGTCGCCG
CAGTACGTGC CCGTCGGCGG GCGCATGCGC GACATCGAAT GCTTCGACAA CGAGTTCTTC
GGCATCAGCA ATCACGACGC GCGGCTGATG GACCCGCAGC AGCGCGTGTT CCTGCAACTC
GCGTGGCATG CGTTCGAAGA CGCGGGCTTC GTGCCGGGCG CGCATCCCGG GCGCGTCGGC
GTGTACGCGG GCGTGAGCCT GAACAGCTAC CTGCACACGA TCGTGTTCCG GTCCGACGAG
GTCGATCTCG ACCGCGACGG CCAGAGCATT CTGTTCGGCA ACCTGAGCGA CTATCTGACG
ACGCGGCTGT CCTATCTGCT CGACCTCAAG GGGCCGAGCG TCAATATCCA GACCGCGTGC
TCGACATCGC TCGTCGCGAT CCACGAGGCA TGCCAGGGTC TGCTGAGCTA CCAGGCGGAC
GTCGCGCTCG CGGGCGCGTG CTCGATCAAC GTGCCGAACA CGCGCGGCTA CCTCTACAGC
CAGGACAGCT TCTTCTCGCC GGACGGCCGG GTGCGCGCGT TCGACGAACA GGCGGCGGGC
ACGGTGTTCA GCAACGGCGC CGGGCTCGTC GTGCTCAAGC GCCTGGACGA TGCGCTGCGC
GACGGCGATC AGATCTACGC GGTGCTGAAG GCGAGCGCGG TCAACAACGA CGGCTCCGAC
AAGGTCGGCT ACGCGGCGCC GAGCGTGTCC GGGCAGAGCG CGGTGATCCG CGACGCGCTG
CACGCGTGCG AGATCCGCCC CGAGCAGATC CAGTATGTCG AGACGCACGG CACGGGCACG
TCGCTCGGCG ATCCGATCGA GATCGCCGCG CTCACGCAGG CGTACGCGGG CGAGCGGCGG
CGCGGCGCGG CCACGCGGCA CGCGACGTGC GCGATCGGTT CGGTGAAGAC GAACATCGGG
CATATCGACG TGGCGGCGGG CGTCGCCGGC GTGATCAAGA CCGCGCTCGC GCTGCGGCAC
AAGACCCTGC CCGCGTCGCT CGGCTTCGAG AAGGCGAACC CGCGGCTCGG CCTCGAGAGC
GGCCCGTTCT ACGTCAACGA CCGCACGCGG CCGTGGGCGT CCGATACGCC GCGCGTCGCG
GCCGTGAGCA GCTTCGGCAT CGGCGGCACG AACGCGCACG CGATCCTCGA GGAGGCGCCC
GCGCGGGAGC CGCTGCCGGC GGCGAAGTCC GCCTACTGCC TGACGCTGTC GGCGCGCACC
GCGTCCTCGC TGGAGGCGCT GCGCGCGAGC TATCTGACGT TTCTGAACGG CGACGATCTG
CCGGCGTTCG CGGATCTCTG CTTCACGTCG AACGTCGGGC GCAAGCCGTT CGCGCATCGG
ATCGCCATCG CGGCGAGCGA CGCGGCGGAC GCCGCGCGGC AACTCGCGGC CGCGGCGGCG
ACGGCGAGCG ACGGACAGCC GCATCGGATC GTGGTGAGCG CGCAGGCGGA CGACGCGAAT
GCGACGTGGC AGGCGATCCG CGGCGGCGAC ATCGATCCGC GCGAGCCGCT GTTCGAGGCC
GCCGATCGCT TCAGCGCCGA GGAGCGGGTG GCGGCGTACG CGGTCCTGCT CGTCGCGCAA
CTGCGGCGGC TCGGCCTCGC CGCCGCGTTG CAGCGGCCCG CGCAGTTGCC GCAGAGCCTC
GTCGAGCGGC TCGCGCCGCG GCAAGACGAT CCGCTGCGCC GGCTGATCGC GGAGCCGCCC
ATCGAAGCCG CGCAGTCCGA CTATGCGCTG ACGCTGCGCG CCGCGTGCGA GCTGCGCATC
GGCCCGGCCG TCCGCGCGCT GGGCGCGCCG TCGCTGCGGG GGCGCTTCGT CGCGGAGCTG
CTCGCGGCCG GCTGGGCGGC CGGCGTGCCG GTGGACTGGG CGTCGTTCCA CGCGGACGAG
GCGCGGCGCA AGACGTCGCT GCCGGCGTAC GCGTTCGCGA AAAAGGTGCT GTGGCTGTCG
ACCGCGACCG ACGCCGAGCG GCGCAACCGC AAGATCGAAG ACATCGGCCA GTGGTTCTAC
AAGCCGACGT GGCGCGAAAC CGCCGCGCTC GCCGCGCGCA CCCGGCGCGC GGATGAACTG
GCCGATGCGA ACGTGCTCGT CTTCAGCGCC GACCGGCTCC ATCGGCTGAA AGCGGGCTGG
GCGCTGGCCG CGCAATGCCT GTATGTCGTG CCGGGCGCCG AATTCGGCCA GTTGAGCGAC
GACACCTATT GCATCGATCC CGCCTCCGAG GACGATTACC GGCGCCTGAT CGAGGCGCTC
GTCGCGCGCG GACGTCTGCC GCGCCACGTC GTGCATGCGT GGCTCGCGGC CGAGGCCGCG
TGGGACGGCA CGCCGGCGAA CTTCGCGAAC TGCCAGGCGC TCGGGCTGTT CAGCCTGATT
TTCTTCGCAC GATCGCTGAA CCGCGTGACG GTCGGCGCCG CCGCGTGCTC GATCGTCGTC
GCCGCGTCGC AGATGGCCGC GCTCACGCCG CAGGAGGCCG TGAACCCGGA CAAGGCGACG
GTGCTCGGCA TCAGCCGGAC GTTGCAGAAG GAGTATCCGC TCATCGATTG CCGGGTCGTC
GACATCGCGT CGCACGAGCT GTTCGACGCG ACCGATTCGG CGATGCAGCT CGGCCTCGAA
TTTCTCGCGC CGCTCACGCC CGATAACGAA ATCGTCGCGC TGCGCGGCGG GCGCCGCTGG
CGGACGGCGT ATCAGCGCTT CGCGGTGCCG GCCAGATGCG AGCCGCAGGT GCGCGCCTCC
GGCGTCTACG TGATCTTCGG CGGGCTCGGC GAGCTCGGGC TGAACGTCGC CGGCTATCTC
GCGAGCCGCG CGCCGTGCAC GCTGCTGCTC GTCAATTCGA AGCGCTTCGT CGCGCGCGAC
GAGTGGGCGG CGTGGCTCGA CGAGCACGGC GCCGATCACC CGTACTCGAA GAAGATCGCG
AAGATTCGCG AGATGGAGCA GGCGGGCGCG ACGGTGCGCG TGCAGCAATG CGACGTCGCG
GACGCCGCGC GCGTCCACGC GGTGCTCGAC GAAGCGCGCG AGCGGCATGG CGAGATCCAT
AGCGTGATCC ACGCGGCGGG CCGCGTCGAG AACGGCATGA TCGACAACAA GGACGTGCGC
CACTTCGCGA CGGTGTTCGA GGCGAAGGTC TACGGCACGT ACAACCTGCT GTCGTACCTG
AAGCGGCACC CGGTGACGAA GGTCATTCTC TGCTCGAGCA TGAACTCGAT CATCGGCGGC
CTCGGGCAGA TCGACAACGC GGCGGCCAAC GCGTTCGTCG ACGCGCTCGC GCAAACGCCG
CTCGCGGCGT CGCTCGGCGA CATCTGCTCG ACCAACTGGG GCGCGGTCAA CGCCGAGCGG
CTCACGCGCC CGAACGTGCT GCCGCAGTTC GCGGACCTGA GCCGCGAGCA CATGCGCAAC
CACATGACCG AGCGCGAGAT CGCGGCGGTC TACGACCGGA TCCTGCACTG GAACTTCGGC
CCGCGCCTCG TCATCTCGAC GATCGATTTC GATTCGGTGC TCGAGCACTG GGGCGAAGTG
AGCAAGGTCA CCGAGCTCGC GCGGCTGCGC CACGTCGCGG CGGAGGCGGG CGAGCGCGCG
CCGGAGGACG ACGGCTACGC GTATCGCTCG GAGCTGCACC GGTTCGTCGA GACGAGCTGG
GCGCGCATTC TCGGCGTCGC GCACGTCGAC TGGGACGGCG TGCTGCTCGA GCTCGGCGCG
CATTCGTTGA GCGCGGTTCA GTTCGTATCG ATGATCAAGG ATCGCTACGA CGTCAGCCTG
CACGCGATGA TCATCTATGA AATCCGGACG TTGGGACTGC TGGTCGAGCA CATCGAAACG
AAGCTGCTCG AGAAGGCCGC TCAGCTTGAA GTCAGCCAAT AA
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| Protein sequence | MRARMRIGVA ATTTKAENTA WSRKVNNLDV AIIGMSGAFP GASDVREFWR NLEAGRCSLE
RYTEQELLDA GVDPAHLKSP QYVPVGGRMR DIECFDNEFF GISNHDARLM DPQQRVFLQL
AWHAFEDAGF VPGAHPGRVG VYAGVSLNSY LHTIVFRSDE VDLDRDGQSI LFGNLSDYLT
TRLSYLLDLK GPSVNIQTAC STSLVAIHEA CQGLLSYQAD VALAGACSIN VPNTRGYLYS
QDSFFSPDGR VRAFDEQAAG TVFSNGAGLV VLKRLDDALR DGDQIYAVLK ASAVNNDGSD
KVGYAAPSVS GQSAVIRDAL HACEIRPEQI QYVETHGTGT SLGDPIEIAA LTQAYAGERR
RGAATRHATC AIGSVKTNIG HIDVAAGVAG VIKTALALRH KTLPASLGFE KANPRLGLES
GPFYVNDRTR PWASDTPRVA AVSSFGIGGT NAHAILEEAP AREPLPAAKS AYCLTLSART
ASSLEALRAS YLTFLNGDDL PAFADLCFTS NVGRKPFAHR IAIAASDAAD AARQLAAAAA
TASDGQPHRI VVSAQADDAN ATWQAIRGGD IDPREPLFEA ADRFSAEERV AAYAVLLVAQ
LRRLGLAAAL QRPAQLPQSL VERLAPRQDD PLRRLIAEPP IEAAQSDYAL TLRAACELRI
GPAVRALGAP SLRGRFVAEL LAAGWAAGVP VDWASFHADE ARRKTSLPAY AFAKKVLWLS
TATDAERRNR KIEDIGQWFY KPTWRETAAL AARTRRADEL ADANVLVFSA DRLHRLKAGW
ALAAQCLYVV PGAEFGQLSD DTYCIDPASE DDYRRLIEAL VARGRLPRHV VHAWLAAEAA
WDGTPANFAN CQALGLFSLI FFARSLNRVT VGAAACSIVV AASQMAALTP QEAVNPDKAT
VLGISRTLQK EYPLIDCRVV DIASHELFDA TDSAMQLGLE FLAPLTPDNE IVALRGGRRW
RTAYQRFAVP ARCEPQVRAS GVYVIFGGLG ELGLNVAGYL ASRAPCTLLL VNSKRFVARD
EWAAWLDEHG ADHPYSKKIA KIREMEQAGA TVRVQQCDVA DAARVHAVLD EARERHGEIH
SVIHAAGRVE NGMIDNKDVR HFATVFEAKV YGTYNLLSYL KRHPVTKVIL CSSMNSIIGG
LGQIDNAAAN AFVDALAQTP LAASLGDICS TNWGAVNAER LTRPNVLPQF ADLSREHMRN
HMTEREIAAV YDRILHWNFG PRLVISTIDF DSVLEHWGEV SKVTELARLR HVAAEAGERA
PEDDGYAYRS ELHRFVETSW ARILGVAHVD WDGVLLELGA HSLSAVQFVS MIKDRYDVSL
HAMIIYEIRT LGLLVEHIET KLLEKAAQLE VSQ
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