| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0032 |
|---|
| Symbol | czcB |
|---|
| ID | 3693409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 60625 |
|---|
| End bp | 62175 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637730286 |
|---|
| Product | heavy metal resistance protein CzcB |
|---|
| Protein accession | YP_335191 |
|---|
| Protein GI | 76819534 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR00999] Membrane Fusion Protein cluster 2 (function with RND porters)
[TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.751867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACAT CGAGCGCGTC GTCGGCGCGC CGTCGCGCGA CGCTTCCCGC CCCCTCGCCC
AACTTCGCTG AAGAACTCGC CATGCAACGC AAGCCCCTGA TTCTCGCCGG CGCGGCCGCA
GCCGGCGCTC TCGCCATCGT GCTGGCGCTC GCGCGCGCGC CGTCCACGTC GTCCGCGCCG
GCGGCCTCCG GGGCCGCCGC GGCCGCGCCC GCATCCGGCG CGACCGGCCC GCACGGCGGC
GCGATGTTCG CGCAAGGCGC GCTGTCCGCC GAAATCGTGC TGTCCGAGAA GCCGGACGAC
GCGCGCCTCG TCGTCTATCC GTTCGTCGAC GGCAAGCCCG TCGAGCAAGG CGCGGCCGTC
TCCGCGACGC TGACCCGCCA CGACGGCGAA CGCGTCGCGC TGCAGTTCGC GCAAGCGGGC
GCGAAGTACA CGTCGGCGCA GCCGATCGCG AGGCCGCACG TGTTCGACGC GTCGATCGAC
GTGAGGATCG GCGCGCGCAG CGCATCGTTT CCGTTCTCGC GCGCGGACGG CGCGATCGCG
CTGGACGACG CTCAGCTCGG CGCGGCGAGG ATCGGCATCG CGCGCGCGGG CCCCGCGCAG
ATCATCACGA GCTTCCAGTT GCCGGGCGAA ATCAAGTTCA ACGAGGATCG CACCGCGCAC
GTCGTGCCGC GCGTCGCGGG GATCGTCGAG CGGGTCGCCG TGTCGATCGG CGAGAACGTC
AAGCCAGGGC AAGTGCTCGC GGTGATCGCG AGCACGGATC TCGCCGATCG CCGCAGCGAG
CTGATGACGG CCGAGCGCCG GCTGCAGGCG GCCCGCACGT CGTACGCGCG CGAGAAGACC
TTGTGGGAGG AGCGGATCTC CGCCGAGCAG GACTATCTGC AGGCGCAGGT GCAACTGCGC
GAGGCGGAGA TCGCCGCGGC GAACGCGCGG CAGAAACTCG CCGCGCTGAA CGCGAGCGCC
GCATCCGGCG CGCTCAACCG CTACGAGCTG CGCGCGCCGT TCGCGGGCAC CATCGTCGAG
AAGCACATCG CGCCGGGCGA GGCGATCGCG GCCGACGCGA ACGTGTTCGT CGTGTCCGAT
CTGTCGTCGG TGTGGGCCGA AATGGCCGTG CCCGCGCAGC GCCTGAACGA CGTGCGCGTC
GGCCGCCACG CGACGGTCAG CGCGGCCGCG TTCGAATCGA AGTCGAGCGG GCCGATCGCG
TACGTCGGCG CGCTGCTCGG CGAGCAGACC CGCACCGCGC CCGCGCGCGT CGTGCTGCCG
AATCCCGACG GCGCGTGGCG GCCGGGCATG TTCGTCAACG TGACCGTCGA CGCCGGCGCG
CAAAACGTGC CCGTCGCTGT CGAGAGCGAC GCGCTGCAGG ACGTCGACGG CGCGCCCGCC
GTGTTCGTTC GAACGCCGAA GGGTTTCGTC GCGCAGGCGG TCGAGACGGG CCGGCGCGAC
GAGCGGCGCG TCGAGATCGT CAAGGGCCTC GCGCCCGGTC AGACCTACGC CGCGGCGAAC
AGCTTCGTGC TGAAGGCGGA GCTCGGCAAG GGCGTCGCCG ACGAGCACTG A
|
|---|
| Protein sequence | MRTSSASSAR RRATLPAPSP NFAEELAMQR KPLILAGAAA AGALAIVLAL ARAPSTSSAP
AASGAAAAAP ASGATGPHGG AMFAQGALSA EIVLSEKPDD ARLVVYPFVD GKPVEQGAAV
SATLTRHDGE RVALQFAQAG AKYTSAQPIA RPHVFDASID VRIGARSASF PFSRADGAIA
LDDAQLGAAR IGIARAGPAQ IITSFQLPGE IKFNEDRTAH VVPRVAGIVE RVAVSIGENV
KPGQVLAVIA STDLADRRSE LMTAERRLQA ARTSYAREKT LWEERISAEQ DYLQAQVQLR
EAEIAAANAR QKLAALNASA ASGALNRYEL RAPFAGTIVE KHIAPGEAIA ADANVFVVSD
LSSVWAEMAV PAQRLNDVRV GRHATVSAAA FESKSSGPIA YVGALLGEQT RTAPARVVLP
NPDGAWRPGM FVNVTVDAGA QNVPVAVESD ALQDVDGAPA VFVRTPKGFV AQAVETGRRD
ERRVEIVKGL APGQTYAAAN SFVLKAELGK GVADEH
|
|---|
| |