Gene BURPS1710b_A0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0029 
SymbolirlS 
ID3693953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp55259 
End bp57406 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content69% 
IMG OID637730283 
ProductIrlS 
Protein accessionYP_335188 
Protein GI76817303 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.368832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCG AGGCTCGCGC CCGCGGCCGT GCTGCGCCGG CGGCGCGAAT CATCGAGGTG 
AATCCAGATG CGAATACTGA TCGTGGAAGA CGAGCCGAAG ACCGGCATGT ATCTGCGCAA
GGGGCTGACC GAAGCGGGCT TCATCGCGGA CTGGGTCGAG GACGGCGTGA CGGGCCTGCA
TCAGGCCGAG ACCGAGGAGT ACGACCTGAT CATCCTCGAC GTGATGCTGC CCGGCCACGA
CGGCTGGACG GTGCTCGAGC GGCTGCGCCG CGCGCACTCG ACGCCCGTGC TGTTCCTGAC
CGCGCGCGAC GACGTCGGCG ACCGCGTGAA GGGGCTCGAG CTCGGCGCGG ACGATTACGT
CGTCAAGCCG TTCGATTTCG TCGAGCTGGT CGCGCGCGTG CGCTCGATCC TGCGCCGCGG
GCAGGCGCGC GAATCGACGG TCCTGCGGAT CGCCGATCTG GAGCTCGACC TGACGCGGCG
CAAGGCCACG CGCCAGGGCG ACGTCGTGCT GCTGACCGCG AAGGAATTCG CGCTGCTGTG
GCTGCTGATG CGCCGCGAGG GCGAGATCCT GCCGCGCGCG ACGATCGCCT CGCAGGTGTG
GGACATGAAT TTCAACAGCG ACACGAACGT CGTCGACGCG GCGATCCGCC GGCTGCGCTC
GAAGATCGAC GACGCGTACG AGCCGAAGCT GATCCACACG GTGCGCGGGA TGGGCTACGT
GCTCGAAGTC AGAAGCGCGA GCGCGCCGAG CCGATGATCA GACGCCTGCT GCCCCGCACG
CTGCGCGCGC GCCTGACGGC GCTCATCATC CTGTCGACCG CGGCGACGCT CGCGCTGAGC
GGCGTCGCGC TCTACAGCGC GCTGCACAAC CGGCTCGTCG GCATGTCGTC GTACGAGATG
TCGGCGACGC TCGCGGCGAT GCGCACGCAT CTCGCGAACG TCGCGAACGT CGACGATATC
CCGCGCAAAT CGGATCTGTG GATCGATCAA CTGCACGGCC ATCAGAATCT GGATCTCGCG
ATCTACGACA CCGACGGCCG CCTGCGCTTC GCCACGCGCG GCTTCGTCGC GCCGCGGCCC
GCGCTCGGCG CGCCGCAAAC GCGCGTGCCG GCGAGCGCCG CGCCCGCCGG CGCGACGTTC
AGCTATCTCG CGGACGACGC GCCGCTGCGC GGCGGGAACC CGCGCACCGC GCGCATCGTC
GTGCAGTACG ACGGCAAGAA CGATCATGCG CTGCTGCGCG CATACGCGTA CACGGTCGTC
GTGATCGAGG TGCTCGCGGT CGTGCTGACG GCGGCGCTCG CCTACGGCAT CGCGATGCTC
GGCCTGAGCC CGCTGCGGCG GCTCGTCGCG CGCGCCGAGC AGATGTCGTC GAGCCGGCTC
GCGCAGCCGC TGCCGGAGCT CGACACGTCG GGCGAGCTCA AGGAAATGGA GCACGCGTTC
AACGCCATGC TCAAGCGCCT CGACGAATCG TTCGTCCGGC TGAGCCAGTT CTCGTCGAAT
CTCGCGCACG ACATGCGCAC GCCGCTCACG AACCTGCTCG CCGAGGCGCA GGTCGCGCTA
TCGAAGCCGC GCACGGCCGA CGAATATCGC GACGTGATCG AATCGAGCAT CGACGAGTAT
CAGCGTCTGT CGCGCATGAT CGAGGACATG CTGTTCCTCG CGCGCTCCGA CAACGCGCAG
AGCCACCTGG CGATCCGCAC GCTCGACGCG GCGGCGCAAG CCGAGCGCGT CGCCGGCTAT
TACGAGCCGA TGGCCGAGGA TGCCGAAGTG AGCATCGTCG TGCGCGGCAA GGCCGAGGTT
CGGGCGGACG CGCTGCTCTA TCACCGCGCG CTCAGCAACC TGATCAGCAA CGCGCTCAAT
CACGCGCCGC GCGGCTCGAC GATCACGATC GAATGCGCGC AAGCCGCCGA CGCGGCGACG
ATCAGCGTAT CGGACACGGG CCGCGGCATC GAGGCGCCGC ACCGCGAACG GATCTTCGAG
CGGTTCTACC GCGTCGATCC GGCGCGGCAC AATTCGGCGT CCGGCACGGG GCTCGGCCTG
GCGATCGTGC GCTCGATCAT GGAAAACCAC GGCGGCACGT GCGGCGTCGA CAGCGAGCCG
CACGTGCGCA CGACGTTCTG GCTGAAGTTT CCCGCGCACG CGGCCTGA
 
Protein sequence
MAREARARGR AAPAARIIEV NPDANTDRGR RAEDRHVSAQ GADRSGLHRG LGRGRRDGPA 
SGRDRGVRPD HPRRDAARPR RLDGARAAAP RALDARAVPD RARRRRRPRE GARARRGRLR
RQAVRFRRAG RARALDPAPR AGARIDGPAD RRSGARPDAA QGHAPGRRRA ADREGIRAAV
AADAPRGRDP AARDDRLAGV GHEFQQRHER RRRGDPPAAL EDRRRVRAEA DPHGARDGLR
ARSQKRERAE PMIRRLLPRT LRARLTALII LSTAATLALS GVALYSALHN RLVGMSSYEM
SATLAAMRTH LANVANVDDI PRKSDLWIDQ LHGHQNLDLA IYDTDGRLRF ATRGFVAPRP
ALGAPQTRVP ASAAPAGATF SYLADDAPLR GGNPRTARIV VQYDGKNDHA LLRAYAYTVV
VIEVLAVVLT AALAYGIAML GLSPLRRLVA RAEQMSSSRL AQPLPELDTS GELKEMEHAF
NAMLKRLDES FVRLSQFSSN LAHDMRTPLT NLLAEAQVAL SKPRTADEYR DVIESSIDEY
QRLSRMIEDM LFLARSDNAQ SHLAIRTLDA AAQAERVAGY YEPMAEDAEV SIVVRGKAEV
RADALLYHRA LSNLISNALN HAPRGSTITI ECAQAADAAT ISVSDTGRGI EAPHRERIFE
RFYRVDPARH NSASGTGLGL AIVRSIMENH GGTCGVDSEP HVRTTFWLKF PAHAA