| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0020 |
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| Symbol | |
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| ID | 3694089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 41119 |
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| End bp | 43764 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637730274 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_335179 |
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| Protein GI | 76817400 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.655193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCAA TCTGCAATCG CCGCCCCCGC CGCGCGCACG CCGGCGTGTG CGCGGATACG
GCGAACGCGC CGGCCGGTTT GCCCGAGGCG GCTCAGCCCG CCGCGCGGCT CGGCGCAGGC
CGGCCGCGCG ACGCGGCCGC GCCGCGATGC GCGCGGCAAG CCACATCGCA CACATCGCAC
GCGTCGCACA CGTTGCACGC GCCGTGCATG CCGCAATTCG CCCCGCGCCG CGTCGTCGCG
CGCGTGGCCG CCGCCGCGCT GTTCTCCGCG TGCGCCGCGC CGGGCGTATC GGGCGCGGCC
GAGCCGGCCG CCGCGACGCG CGGGTACGAC ATTCCGGCGG GCCCGCTCGA CGCGGCGCTG
ACCCGCTTCG GCCGCGAGGC CGGCATCCTG CTGTCGTTCC CGGGCGAGCT GACCACGGGC
CTGCGAAGCC CCGGGCTGCA CGGCCGCGCG GATCCGGCCG CGGCGCTCGA CCGGCTGCTG
ACGGGCACGG GGCTCGTCGC GCTCCGGCAG CCGAGCGGCG GCTACACGCT CGCCAGACTG
CCCGGGCCGG CCGCCGCCGG CGCCGATGCC GCGCTCGCGG CCGACACGAC GCTGCCCACC
GTCGCCGTGC GCGCGAGCGG CCCGCACGCG GACAGCTACC GGCCGCCGCG CGAGGCGGCG
GGGCTGCGCA GCGACGCGCC GCTCGCCGAG GTGCCGCAAG CGGTCGCCAT CGTCGCGCAG
CAGGTGCTGC GCGACCAGCG CCCGCGCAAT CTCGACGACG CGCTTGCGAA CGTGAGCGGC
ATCACGCAGG GCAACACGCT CGGCAGCACG CAGGACACGG TGATGAAGCG CGGCTTCGGC
GACAACCGCG ACGGCTCGGT GATGCGCAAC GGAATGCCGA TCGTGCAGGG CCGCTCGCTG
AACGCGACGA CGGACAGCGT CGAAGTGCTG AAGGGCCCGG CCTCGCTGCT GTACGGCATC
ATGGACCCGG GCGGCGTGAT CAACGTCGTC ACGAAGCAGC CGCAGCTCGC GCGCCGCCAC
GCGATCTCGG CGCTCGGCTC GACGTACGGC GGCGGCAGGA ACGGCGGCGA GCTCACGTTC
GACTCGACGG GCGCGATCGG CGAGTCGCGC GTTGCATACC GGCTGATCGT CGATCAGACG
AACGAACAGT ATTGGCGCAA CTACGGCGAG CACCGCGAGA CGCTCGTCGC GCCTTCGCTC
GCGTGGTACG GGCGCGATAC GCAGATGGTG CTGTCGTACG AGTACCGGCG CTTCCTGATG
CCGTTCGATC GCGGCACCGC GCTCGATCCG CGCACGAACG CGCCGCTCGC GATCCCGGCG
CGCCGCCGGC TCGACGAGCC GTTCAACGAC ATGCGCGGCG AATCGAATCT CGCGCAGCTC
GCGATCGATC ATCAGCTCGC GCCGGACTGG AAGGTGCACG TCGGCTACAG CTACAATCGG
GAGACCTACG ATGCGAACCA GATTCGCATC ACGGCGGTCG ATCCGCTCAA GGGCACGCTC
ACGCGCAGCA ACGACGCGAC GCACGGCTCG CGCAGCACCG ACAGCTACGG CATCGCGTAC
GTCGACGGCC GCGTGACGCT CGCCGGGATG CGGCACGACG TGCAGTTCGG CGTCGACGGC
GAATACCGGC AGGTCTACCG CGCGGACATG CTGCGCCAGC CGATCAAGAC GCCGTTCAGC
TATCTGAACC CGACGTACGG GCTCGTCCCG CCGTCGACGA GCGTATCGGC CTCCGACAGC
GACCAGAGCG ACACGCTGCA CACCGCCTCG CTGTTCTTCC AGGACAGCAT CCATCTGAGC
GAGCGGTGGA TGCTCGTCGG CGGCGCGCGC TGGGTCCGCT ACAGCCAGCT TGCCGGGCGC
GGCCGGCCGT TCCAGGTCAA CACGAACCTG AGCGGCACGA AGTGGCTGCC GCGCGCGGGC
ATCGTCTACA AGTGGAACGA CGCGCTGTCG CTGTACGGCA GCTACACGCA GTCGCTGAAG
CCGACCTCGA AGATCGCGCC GATGGCGGGC GGCTACGTGA TCGACGGCTC GACCGCGCCC
GAGGAAGGCG CGTCGTGGGA GCTCGGCGCG AAGCTCGACA TGCCGGGCGG CCTCGCCGGC
ACGCTCGCGT TCTTCGACAT CGACAAGAAG CACGTGCTCG TCTCGCAATA CGACGACGCG
ACGAACCAGA CCGCGTGGCG CACGTCCGGC CGCGCGCGCT CGCGCGGGAT CGAGCTCGAC
GTGTCGGGGC GGATCGGCGC GCGCTGGAAC GTGATCGCGA GCTACGCGTA CATCGACGCG
AAGACGACCG AAGATCCGCT GTACGCGGGC AACCGGCTGT GGAACGTCGC GCGGCACACG
GCCTCGCTCG CGGCGGTCTA CGACGTGGGC ACGGTGCTCG GCGGCGACGA CCTGCGCATC
GGCGCGGCGG GGCGCTACGT CGGCGCGCGC CCGGGCGATT CGGCCAACAG CTTCACGCTG
CCGGCGTACG CGACCGCCGA CGCGTTCGCG ACCTACGACA CGCGGCTCGG CAAGCAGAAG
CTGCAGTTCC AGCTCAACGT GAAGAATCTG TTCAACCGCA CGTATTACCC GTCGAGCGTG
AACCGGTTCT TCGTGTCGGT GGGCGACGCG CGGCAGGTGT CGCTGCTGAC GACGCTGCAG
TTCTGA
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| Protein sequence | MDSICNRRPR RAHAGVCADT ANAPAGLPEA AQPAARLGAG RPRDAAAPRC ARQATSHTSH
ASHTLHAPCM PQFAPRRVVA RVAAAALFSA CAAPGVSGAA EPAAATRGYD IPAGPLDAAL
TRFGREAGIL LSFPGELTTG LRSPGLHGRA DPAAALDRLL TGTGLVALRQ PSGGYTLARL
PGPAAAGADA ALAADTTLPT VAVRASGPHA DSYRPPREAA GLRSDAPLAE VPQAVAIVAQ
QVLRDQRPRN LDDALANVSG ITQGNTLGST QDTVMKRGFG DNRDGSVMRN GMPIVQGRSL
NATTDSVEVL KGPASLLYGI MDPGGVINVV TKQPQLARRH AISALGSTYG GGRNGGELTF
DSTGAIGESR VAYRLIVDQT NEQYWRNYGE HRETLVAPSL AWYGRDTQMV LSYEYRRFLM
PFDRGTALDP RTNAPLAIPA RRRLDEPFND MRGESNLAQL AIDHQLAPDW KVHVGYSYNR
ETYDANQIRI TAVDPLKGTL TRSNDATHGS RSTDSYGIAY VDGRVTLAGM RHDVQFGVDG
EYRQVYRADM LRQPIKTPFS YLNPTYGLVP PSTSVSASDS DQSDTLHTAS LFFQDSIHLS
ERWMLVGGAR WVRYSQLAGR GRPFQVNTNL SGTKWLPRAG IVYKWNDALS LYGSYTQSLK
PTSKIAPMAG GYVIDGSTAP EEGASWELGA KLDMPGGLAG TLAFFDIDKK HVLVSQYDDA
TNQTAWRTSG RARSRGIELD VSGRIGARWN VIASYAYIDA KTTEDPLYAG NRLWNVARHT
ASLAAVYDVG TVLGGDDLRI GAAGRYVGAR PGDSANSFTL PAYATADAFA TYDTRLGKQK
LQFQLNVKNL FNRTYYPSSV NRFFVSVGDA RQVSLLTTLQ F
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