| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3730 |
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| Symbol | pilQ |
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| ID | 3690543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 4068029 |
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| End bp | 4069756 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637730185 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_335094 |
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| Protein GI | 76809042 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.605759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGCG GGCTCGTTCG ATTCTTGCTG GGATGCGCGC TCGGAGCGGC GGGCGAGGCA
GTTGCATCGT TGCCGCCGCT GCCCGTCGGC GCCCCGTCCG GCTGGTCGGC GTCCGCTTCG
GTCGGCGCAG CGGGGCGTGC GCCGTTGCCG GAGGCGGCCG CGCCGCAATG GCGATTCGAT
TCGGCGCGCG ACCCGGTTGC CGGCGCACCT TCGCCGGATG TGGACGGCGG GGCGCCAGCG
GCTGAATTCG CCGGCGAGGC CACGCCCGAA CGCATGCCGG CGGCCCCAAC GGCGGAACCG
GCCCGCTCGA CGTCCGCCGA CGCCGGAACG TCGAGCGCAG TGGCATCGGC GGGGTTGCAA
GCGCGGGAGG CCGCGCTGGA GGGGCCGCCC GTGCCGCTCG CGCCGGCGCA ACGCATGAGC
GACGAGAGCG ACGAGCATCG TTCGTCGCCG CCGGCCGCCG GCGCCGTATC GACCGCGAGC
GTCGCCGGCA CCGGCACCGA GACGGGCGAT CCATCCGGCG ACAATCGCCC GATCTCCATC
AATCTGCAAC AGGCGAGCCT CGCCGCGGTC TTCGATGCAT TCGCGCGTTT CACGGGCCTC
AATATCGTGG TCAGCGAGCG GGTGCGCGGC ACGGTGTCGT TGCGTCTGAA CAATGTCCGC
TGGCGCAGTG CGTTCGATGC GCTGCTGGAC GCCCACGGCC TCGCGATGGC GCGGCGCGGC
AGCGTGATAT GGGTGGCGCC CGTCGCGGAA CTCGCCGAGC GCGAGCGCCA GCGTTTCGAT
GCGCATGCGC GCGCCGCCCA GCTCGAGCCG CTCGCGAGCC GCGGCTTCGT GCTGCGCTAC
GCGCGCGCGG CCGACGTGCA GCGTCTGCTC GCAGGCTCGG CCGGCCAGCG CATCCTGTCC
AAGCGCGGCT CGGTGTTGGC CGATCCTCGG ACGAATCTGC TGTTCGTCAC CGATCTGTCC
GGACGCCTCG CGCAGATCGC CGATCTGATC GGCAAGCTCG ATACGCCGTC GCGCCAGGTA
TTGATCGAAG CGAGGATCGT CGAGGGCGAT CGCGGGTTCT CGCGCAATCT CGGCGCGCGC
CTCGCGCTGC GCGCGCCCGA TGCGGGTGAA CGCGCGACGG GCATCGTCGC CGGCCGCAAC
GGCACGCTGG CGGAGCTCGC CGCCAGGCCG ATCAGCGGCT TCGACGCGGC GACGGCCGGC
CTCACGCTGT TCGCCGCGCG CGCGAGCCGC CTGCTCGACG TCGAGTTGAG CGCGCTCGAG
GCCGAGGGCC GGGGCCAGAT CGTGTCGAGC CCGCGCGTCG TGACGGCGGA CCGGACCAAG
GCCGTCGTCG AGCAGGGCGC CGAGCTGCCG TACCAGGCGA AGGTCGGCAA CGGCGTATCC
GGCGTCCAGT TCCGGCGCGC GACCTTGAAG CTCGAGGTCG AGCCGCAGAT CACGCCCGAC
GGGCGTGTGA TTCTCGATCT CGACGTCGCG AAGGATAGCG TCGGCGAGGA AACCGCGTCC
GGCCCCGCGA TTCATACGAA GCATGTGCAG ACGCGAGTGG AAGTCGAAAA CGGCGGAACG
GTGTCGATCG GCGGGATTTT CGAGAGCGAC GACCGCGACG ATGTGACTCG CGTGCCGCTC
TTGGGCAAAA TACCGGTGTT GGGCGCGCTT TTCAGGCATC GCGCGCAGCG TGCGCAGCGC
AGCGAGCTCG TCGTCTACAT CACGCCGACC GTCGTGATCG GGCCCTGA
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| Protein sequence | MRRGLVRFLL GCALGAAGEA VASLPPLPVG APSGWSASAS VGAAGRAPLP EAAAPQWRFD
SARDPVAGAP SPDVDGGAPA AEFAGEATPE RMPAAPTAEP ARSTSADAGT SSAVASAGLQ
AREAALEGPP VPLAPAQRMS DESDEHRSSP PAAGAVSTAS VAGTGTETGD PSGDNRPISI
NLQQASLAAV FDAFARFTGL NIVVSERVRG TVSLRLNNVR WRSAFDALLD AHGLAMARRG
SVIWVAPVAE LAERERQRFD AHARAAQLEP LASRGFVLRY ARAADVQRLL AGSAGQRILS
KRGSVLADPR TNLLFVTDLS GRLAQIADLI GKLDTPSRQV LIEARIVEGD RGFSRNLGAR
LALRAPDAGE RATGIVAGRN GTLAELAARP ISGFDAATAG LTLFAARASR LLDVELSALE
AEGRGQIVSS PRVVTADRTK AVVEQGAELP YQAKVGNGVS GVQFRRATLK LEVEPQITPD
GRVILDLDVA KDSVGEETAS GPAIHTKHVQ TRVEVENGGT VSIGGIFESD DRDDVTRVPL
LGKIPVLGAL FRHRAQRAQR SELVVYITPT VVIGP
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