Gene BURPS1710b_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3688 
SymbolhisA 
ID3690072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp4029135 
End bp4029890 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID637730143 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_335052 
Protein GI76809936 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.810449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGA TTCCGGCCAT CGATCTTAAA GACGGTCAGT GTGTGCGCCT CAAACAAGGC 
GATATGGACC AGGCGACGAT TTTTTCCGAG GATCCTGCGG CGATGGCCCG TAAATGGGTC
GATCTCGGGG CGCGGCGTCT GCATCTCGTC GATCTGAACG GCGCGTTCGC CGGCAAGCCG
AAGAATCTCG AGGCGATCGA GGCGATCCTC GGCGAGGTCG GCGACGAGAT CCCCGTGCAG
CTCGGCGGCG GCATCCGCAG CCTCGAGACA ATCGAGAAAT ATCTCGACGC GGGCCTGTCG
TACGTGATCA TCGGCACGGC GGCGGTGAAG GACCCGGGCT TCCTGCAGGA CGCGTGCAGC
GCGTTCGCGG GCAACATCAT CGTCGGCCTC GACGCGAAGG ACGGCAAGGT CGCCACCGAC
GGTTGGAGCA AGCTCACGGG CCACGAAGTG ATCGATCTCG CGCGCAAGTT CGAGGACTAC
GGCGTCGAAT CGATCGTCTA CACGGACATC GGCCGCGACG GGATGTTGCA GGGCATCAAC
ATCGAGGCGA CCGTGAAGCT CGCGCAGGCG GTCGGCATTC CGGTGATCGC GAGCGGCGGC
CTGTCGAACA TCGTCGACAT CGAGAAGCTC TGCGAGGTGG AAGACGAGGG CATCGAAGGC
GTGATCTGCG GCCGGGCGAT CTACTCGGGC GACCTCGATT TCGCCGCCGC GCAAAAGCGC
GCGGACGAAC TGAACGGCGA GCTCGACGAC GCCTGA
 
Protein sequence
MLLIPAIDLK DGQCVRLKQG DMDQATIFSE DPAAMARKWV DLGARRLHLV DLNGAFAGKP 
KNLEAIEAIL GEVGDEIPVQ LGGGIRSLET IEKYLDAGLS YVIIGTAAVK DPGFLQDACS
AFAGNIIVGL DAKDGKVATD GWSKLTGHEV IDLARKFEDY GVESIVYTDI GRDGMLQGIN
IEATVKLAQA VGIPVIASGG LSNIVDIEKL CEVEDEGIEG VICGRAIYSG DLDFAAAQKR
ADELNGELDD A