| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3678 |
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| Symbol | |
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| ID | 3688404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 4023457 |
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| End bp | 4024623 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637730133 |
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| Product | DegQ protease |
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| Protein accession | YP_335042 |
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| Protein GI | 76809512 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.320686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTCG CACTGATGTT CATCGTGGCG ACGCTCAAGC CGCAATGGCT CCAACGGCAG
GGCCAGCTCG GCAAGCAGCT CGCGGCGCCG ATCGTCGCGC TGCGGGAAGT CGCGCCCGGC
GTCGGCGGCG CGCCCGCTCA ATCCTCGTAT GCGGACGCCG CGCAAAAGGC GATGCCCGCG
GTCGTCAACG TGTTCTCCAG CAAGGACGGT TCGCTGCCGC CCGATCCGCG CGCGAAGGAT
CCGCTGTTTC GCTATTTCTT CGGCGACCGC AACGCGCGCC GGCAGCAGGA GGAACCCGCG
GCCAATCTGG GGTCGGGCGT CATCGTAAGC TCGGAGGGTT ACATTCTAAC GAACCAGCAC
GTCGTCGACG GCGCGGACCA GATCGAAGTC GCGCTCGCCG ACGGCCGCAC GGCCACCGCG
AAGGTGATCG GCAGCGATCC GGAAACCGAC CTCGCGGTGC TCAAGATCAA CATGACGAAC
CTACCGACGA TCACGCTCGG CCGCTCCGAC CAGTCGCGCG TGGGCGACGT CGTGCTCGCG
ATCGGCAACC CGTTCGGGGT CGGCCAGACG GTCACGATGG GGATCATCAG CGCGCTCGGG
CGCAACCACC TCGGCATCAA CACGTTCGAG AACTTCATCC AGACCGACGC GCCGATCAAC
CCGGGCAATT CGGGCGGCGC GCTCGTCGAC GTAAACGGCA ACCTGCTCGG CATCAATACG
GCGATCTACT CGCGCTCGGG CGGCTCGCTC GGCATCGGCT TCGCGATCCC CGTGTCGACC
GCGCGCAACG TGCTCGAGAG CATCATCACG ACGGGCACCG TCACGCGCGG CTGGATCGGC
GTCGAGCCGC AGGACGTGAC GCCGGAGATC GCCGAATCGT TCAGCCTTGC GCAAAAATCG
GGCGCGATCG TTGCGGGCGT GCTGCAAGGC GGCCCGGCCG ACAAGGCGGG CATCAAGCCG
GGCGATATTC TGATGTCGAT CGACGGCGAG GACATCACCG ATACGACGAA GCTGCTGAAC
GTCGTCGCGC AGATCAAGCC CGGCACGCCG GCGAAGGTTC ACGTGGTGCG CAAGGGCAAG
GAGCTCGACG TCACCGTCGT GATCGGCAAG CGGCCGCCGC CGCCGAAGCA GGCGCTCGAC
GACCAGAACA GCGACGAGGA GGAGTGA
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| Protein sequence | MLLALMFIVA TLKPQWLQRQ GQLGKQLAAP IVALREVAPG VGGAPAQSSY ADAAQKAMPA
VVNVFSSKDG SLPPDPRAKD PLFRYFFGDR NARRQQEEPA ANLGSGVIVS SEGYILTNQH
VVDGADQIEV ALADGRTATA KVIGSDPETD LAVLKINMTN LPTITLGRSD QSRVGDVVLA
IGNPFGVGQT VTMGIISALG RNHLGINTFE NFIQTDAPIN PGNSGGALVD VNGNLLGINT
AIYSRSGGSL GIGFAIPVST ARNVLESIIT TGTVTRGWIG VEPQDVTPEI AESFSLAQKS
GAIVAGVLQG GPADKAGIKP GDILMSIDGE DITDTTKLLN VVAQIKPGTP AKVHVVRKGK
ELDVTVVIGK RPPPPKQALD DQNSDEEE
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