Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3669 |
Symbol | |
ID | 3689866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 4016861 |
End bp | 4018249 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637730124 |
Product | prophage CP4-like integrase |
Protein accession | YP_335034 |
Protein GI | 76810764 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.18314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTCTCC GACGACCTCC AAAGTCGTCC GAAAACCCCG CTAGAGTCCT TGATTCTGCG GGGTTTTTTG TTGTCCAGCG CCCTCCGAAG CTCCGATGGA ATCGAATAAG GTCCAATAGG CTTGCTGGTA TATTCGTTGG TATCGCGCAA ACGCCTGTTG GTACCAACGA CATGAACCTT TCAGATCTCG CTGTCCGCAA CGCCAAGCCA CAAGACAAGC CGTACAAACT GACGGACGGC GACGGCATGT TCTTGCTCGT GCAGCCGAAC GGCGGGAAGT ACTGGCGGCT CGCGTACCGC TATCTGGGAA AGCAGAAAAC ATTGGCTTTG GGCGTGTACC CCGAGGTTAG TCTCGCCCTC GCCCGGCAGC GACGAGCGGA AGCACGCGAG CAGTTGGCAA AGGGGGCGGA TCCGGGGGAA ACCAAGAAGG CGGATAGGCG GGCCGCCCGT TTAGCCGCGG ACAATTCGTT CGAAGTCGTC GCATTGGCTT GGCTGGAGGA GCGTCGACCG TATGTCGAGC CTCGGCAGCA TGAGCGCACG CTGGTACGGT TGAAGAACGA TGTGTTCCCC TGGCTTGGCA AGCGCCCAAT TGCGGACATT GATGCCCCGG AGATCCTGGC CGTGCTGAAG CGGATCGATA GCCGTGGTGC TCGGTTCACA GCGCATCGCA TCCGCAGCGA GATTGGCCGG GTCTTCGTCT ATGGGATCAA GGAAGGGCAT TGCAAGGCCA ACCCTGCGGC GAGTCTGGTG AAGGCCATCC CGCCGGCGCA GACGACGCAC TTCGCGTCGA TTACCGAGCC CGCACAGGTT GGAGAAATGT TGCGGGCGTT CGACGGTTTT TCCGGCACGT TCCCCGTGCT TTGTGCGCTC AAGCTCGCAC CGATGCTGTT CGTGCGCCCC GGGGAGCTGC GCAAGGCGGA ATGGTCCCAC TTCGATCTCG AGAAAGCGGA GTGGCGCTAC TTGGTCACGA AGACCAAGAC CGAGCATCTC GTTCCGCTGG CCACACAAGC CGTCAAGATT CTGAAGGAGC TGCACGCCGT GACCGGGAGC GGACAGTACG TGTTTCCGGG CGCCCGTTCC AAGCAGCGTC CGATGAGCGA TGCTGCAATC AACGCCGCGC TGCGTCGTTT GGGTTACGAC ACGCGTACCG AAATCACCGG CCATGGATTC CGAGCGATGG CTCGGACGAT TTTGCACGAA GAGTTGGAGC AGAAACCGGA AGTCATCGAG CATCAACTCG CGCACACCGT GCCGGACACG CTGGGCAGAG CATACAACCG GACGAAGTTC ATCAAGGAGC GGTGCGCCAT GATGCAGAAG TGGGCCGACT TTCTCGATCA ATTGAAGCTC GGCGCAAAGA TCATCCCGAT TGCCGCTGTT GCCAGTTAG
|
Protein sequence | MLLRRPPKSS ENPARVLDSA GFFVVQRPPK LRWNRIRSNR LAGIFVGIAQ TPVGTNDMNL SDLAVRNAKP QDKPYKLTDG DGMFLLVQPN GGKYWRLAYR YLGKQKTLAL GVYPEVSLAL ARQRRAEARE QLAKGADPGE TKKADRRAAR LAADNSFEVV ALAWLEERRP YVEPRQHERT LVRLKNDVFP WLGKRPIADI DAPEILAVLK RIDSRGARFT AHRIRSEIGR VFVYGIKEGH CKANPAASLV KAIPPAQTTH FASITEPAQV GEMLRAFDGF SGTFPVLCAL KLAPMLFVRP GELRKAEWSH FDLEKAEWRY LVTKTKTEHL VPLATQAVKI LKELHAVTGS GQYVFPGARS KQRPMSDAAI NAALRRLGYD TRTEITGHGF RAMARTILHE ELEQKPEVIE HQLAHTVPDT LGRAYNRTKF IKERCAMMQK WADFLDQLKL GAKIIPIAAV AS
|
| |