Gene BURPS1710b_3649 details

Gene Information

• Locus tag: BURPS1710b_3649
• ID: 3690135
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 3974611
• End bp: 3975273
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637730104
• Product: hypothetical protein
• Protein accession: YP_335014
• Protein GI: 76810780
• COG category: [S] Function unknown
• COG ID: [COG3455] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03349] type IV / VI secretion system protein, DotU family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.106209
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTTCC TGCTGAAGAA CGGCCGCGAG CCGAACGACG CGTCGGAATT CGGCACGCGC 
ATTCAGGAAT TCCTGAGCGA GTTCGAACGC GGCGCGAAGA AGCTCAACAT CGCCGCCGAC 
GACGTCTATG CGGCGAAGTT CGCGTTTTGC GCGGCGATCG ACGAATCGGT GCTGTCGTCG 
CCGTTCAAGA TCCGCGCGGA CTGGGAGCGC CGGCCGTTGC AGCTCGTGCT GTTCGGCGAG 
CAACTCGCGG GCGAGAAGTT CTATCAGTAC CTCGAAGAAT GCCGCGCACA GGGCGCGGCG 
CGGCTGCAGT CGCTCGAGGT GTTCCATATG TGCCTGCTGC TCGGCTTCCA GGGCAAGTAT 
CTGCTCGAAG GGCCGGAAAA GCTCGCGTAT CTGACCGCAC GGCTTGGCGA CGAGATCGCG 
AACATGAAGG GCAAGCGCGC ACCGTTCGCG CCGCATTGGC CGCTGCCGGA CCAGATCTCG 
CACCGGCTCA AGCGCGAGGT GCCGCTGTGG GCGATCGGAG CGGTGTTCGC GCTCGTCGGG 
CTGCTGGCGT TCGTCGGGCT GAATACGTAT TTGAAAGACA GCACCGTGCG GGCGCTCGCG 
CCTTATTCGC AAGTCATCAA GGTGGGGCCG GAGTCGGCTA ATTTGACGAT TTCGTTGCCT 
TGA 

 

Protein sequence

MLFLLKNGRE PNDASEFGTR IQEFLSEFER GAKKLNIAAD DVYAAKFAFC AAIDESVLSS 
PFKIRADWER RPLQLVLFGE QLAGEKFYQY LEECRAQGAA RLQSLEVFHM CLLLGFQGKY 
LLEGPEKLAY LTARLGDEIA NMKGKRAPFA PHWPLPDQIS HRLKREVPLW AIGAVFALVG 
LLAFVGLNTY LKDSTVRALA PYSQVIKVGP ESANLTISLP