| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3625 |
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| Symbol | |
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| ID | 3690210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 3947329 |
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| End bp | 3949140 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637730080 |
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| Product | secretion protein, putative |
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| Protein accession | YP_334990 |
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| Protein GI | 76810719 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.268433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGTG CGTGCCCGGC CCCGTCGTCG GGCACGCATG CCGTATTGGT TCGCCTCGCC
TGTGGCGCAC CGCGCGATCC GCCGCCCGCG CACACCGCGC CCCATATCCC CAAGCCAATC
GCTTTCCGCT CGAAACTTCC GGCACGCTTG GGGGAAAGAT TTCAAATATC GTCAAAACGT
AGACCAACGC GCTTTCCTGT TCGGCCGGGC TCCGATACTT TTGATGCGAC GCCACCGAAT
TCGAATCGTC CGCATCCGAG GCCCGGGCCG ACGCGCTTTC CGGCAAGCGG CCACCGCGGA
CGATTCGTCG ATGAAACGCC GAACGCCGCC TCGCATCGCG GCTTCGTTCG CCGGGACATC
GCCACGACAT CCATGACGAG CCAGACATGC CCGAACCGAC TCGAGCACGA ATCGACGTCA
CTGCGCGCAG TGACCGCCCC ATCGCCGCGG CGCACGCCGC CGCCCGCCGC GGCGCGCGAA
CCGTTTGACG ACAGCGCGAC ACGGCTTCGC GACGACATAC ACGCTACTTT CGGCAGTCCC
TCCATGACGC CCAACACTCC ACTCTTTCGA ACGGCCGCTC AGGAAGCGCA GCGCACGCAG
ACGCTCGGCG AGATCGTGCT GATCCGTCCC GTGTCGTTCG CCGTGCTCGC GAGCGCGGCC
GCCAGCATGG CGCTCGGCGT GATCCTGCTC TTCACGTTCG GCACCTATAC GCGGCGCACG
ACGGTCGACG GCGTGCTCAC GCCGGACACG GGCCTCGTCA AGGTCTATGC GCAGCAGACA
GGCGTCGTGC TGAAGAAGAA CGTCGTCGAA GGGCAGCACG TGACGCGCGG ACAAGTGCTC
TACACGGTGT CGACCGATCT GCAGAGCGCG GCGGCGGGCC AGACGCAAGC CGCGCTCATC
GAGCAGGCTC AGCAGCGCAA GACTTCACTC CAACAGGAGC TAGACAAGAC CCGGCGTCTG
CAACAGGACG AGCGCGACAC GCTGCAATCG AAGATCGCGA GCCTGCGCAC CGAGCTCGCG
GGCATCGACG ATCAGATCGC CGCGCAACGC ACGCGCGCAT CGATCGCGGC CGACGCCGCG
TCGCGCTACG CCGGCCTGCT CGCTCAGGAC TACATCTCGA AGGATCAGGC ACAGCAGCGC
CAGGCCGATC TGCTCGATCA GCGCTCGAAG CTGAACAGCC TGATGCGCGA CCGCGCGAGC
ACGGCGCAAT CGCTGAAGGA GGCGCTCAAC GATCTGTCGG GGCTGTCGCT CAAGCAGCAG
AACCAGTTGT CGCAGATCGA CCGCAGCGTG ATCGACGTCG ACCGCACGCT GATCGAAAGC
GAGGCGAAGC GCGAGTTTGT CGTCACCGCG CCGGAAACGG GCACCGCGAC CGCGGTGATC
GCCGAGCCGG GCCAGACCGC GGACACGTCG CACCCGCTCG CGAGCATCGT GCCGACGGGC
GCGCATTGGC AAGCGTATCT GTTCGTGCCC AGCGCGGCGG TCGGCTTCGT GCACGTCGGC
GATCGCGTGC TCGTGCGCTA TCAGGCGTAT CCGTACCAGA AGTTCGGCCA GTACGAAGCG
AGCGTCGTGT CGATCGCGCG CACCGCGCTG TCGGCCGCCG AGCTCGCGAC GAGCGGCGGC
CCGGCCGCGC AGACGGCAAG CGGCACGTAC TACCGGATCA CGGTCGCGCT GAATTCGCAG
AACGTGATGG CGTACGGCCG GGCGCAGCCG CTGCAGGCCG GCATGGCGCT GCAAGCCGAC
GTGCTGCAGG AGCGCCGCCG CCTGTACGAA TGGGTGCTCG AACCTCTTTA CAGCCTGACG
GGCAAACTCT GA
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| Protein sequence | MLSACPAPSS GTHAVLVRLA CGAPRDPPPA HTAPHIPKPI AFRSKLPARL GERFQISSKR
RPTRFPVRPG SDTFDATPPN SNRPHPRPGP TRFPASGHRG RFVDETPNAA SHRGFVRRDI
ATTSMTSQTC PNRLEHESTS LRAVTAPSPR RTPPPAAARE PFDDSATRLR DDIHATFGSP
SMTPNTPLFR TAAQEAQRTQ TLGEIVLIRP VSFAVLASAA ASMALGVILL FTFGTYTRRT
TVDGVLTPDT GLVKVYAQQT GVVLKKNVVE GQHVTRGQVL YTVSTDLQSA AAGQTQAALI
EQAQQRKTSL QQELDKTRRL QQDERDTLQS KIASLRTELA GIDDQIAAQR TRASIAADAA
SRYAGLLAQD YISKDQAQQR QADLLDQRSK LNSLMRDRAS TAQSLKEALN DLSGLSLKQQ
NQLSQIDRSV IDVDRTLIES EAKREFVVTA PETGTATAVI AEPGQTADTS HPLASIVPTG
AHWQAYLFVP SAAVGFVHVG DRVLVRYQAY PYQKFGQYEA SVVSIARTAL SAAELATSGG
PAAQTASGTY YRITVALNSQ NVMAYGRAQP LQAGMALQAD VLQERRRLYE WVLEPLYSLT
GKL
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