Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3607 |
Symbol | |
ID | 3688234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 3928484 |
End bp | 3929272 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637730062 |
Product | class III extradiol-type catecholic dioxygenase family protein |
Protein accession | YP_334972 |
Protein GI | 76810008 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGCC TACCGTCCCT CTATCTGTCG CATGGCGCGC CGACGCTGCC GATCGATCCG ACGCTGCCGT CCGGCGCGTT CACCGAGCTC GGCGCCGAGC TGCCGCGGCC GCGCGCGGTG CTGATGCTGT CCGCGCACTG GCTCACGCAG CAGCCCGTCG TCAGCACCGC CGAGCGGCCG GACACGATTC ACGACTTCTA CGGCTTTCCG CGCGCGCTCT ATGAAATTCG CTATCCGGCG CCCGGCGCGC CCGACGTCGC GGCGCACGCG GCCGCGCTAC TGCGCAGCGC CGGCATCGAG ACCGCGGCCA CGCCGCACGG CCTCGACCAT GGCGCATGGG TGCCGATGCT GCTGATGTTC CCGCACGCCG ACGTGCCGGT CGCGCAACTG TCGATCCAGC CGCGCGCCGA TGCCGCGCAC CACTTCCGCG TCGGGCGCGC GCTGCGGCCG CTGCGCGACG AAGGTGTGAT GGTGATCGGC TCGGGCCAGA TCACGCACAA CCTGCGCGCG GCGGATTTCT CGGCCGCGCC CGACGATGTG GATCCGCGCG TCGCCGAATT CACCGGCTGG TTCGAGGAAG CGCTCGCCGC GCGCGACGTC GACGCGCTCG TCGACTATCG CCGCCGGGCG CCGCACGCGG CGCTGATGCA TCCGACCGAC GAGCATCTGC TGCCCGTGTT CGCGGCCCTC GGCGCAGCGG ACGACGACTA TCGGTTGAGA ATTCAGTCGC TCGGCACGTA CCAGCGCATG CTCGCGATGA CGAATTACGT GTTCGATTCG GCGGCCTGA
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Protein sequence | MNRLPSLYLS HGAPTLPIDP TLPSGAFTEL GAELPRPRAV LMLSAHWLTQ QPVVSTAERP DTIHDFYGFP RALYEIRYPA PGAPDVAAHA AALLRSAGIE TAATPHGLDH GAWVPMLLMF PHADVPVAQL SIQPRADAAH HFRVGRALRP LRDEGVMVIG SGQITHNLRA ADFSAAPDDV DPRVAEFTGW FEEALAARDV DALVDYRRRA PHAALMHPTD EHLLPVFAAL GAADDDYRLR IQSLGTYQRM LAMTNYVFDS AA
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