| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3597 |
|---|
| Symbol | |
|---|
| ID | 3690700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 3920483 |
|---|
| End bp | 3921196 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637730052 |
|---|
| Product | isochorismatase family protein |
|---|
| Protein accession | YP_334962 |
|---|
| Protein GI | 76810859 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCGAC GCGCGCACGC AACCGATCTG ACGGGCGCGC GGGCGCCGGC GGCGACGAGC
GTCGCCGGTT CGGCGGCGTC GACGCCGACG CCGATGTCGG TGCAGGTGTC GATGCCGGCG
GCCGGGGGCG AATGGCTGAA CGATGAAAAC GGAGGGCGTT GCATGGCGAG GGCGGCGGTG
ATCGTGGTGG ACATGCAGCG CGGGCTGCTG CAGCGGGCGA AGCCCGCGCA TCGGCTCGAC
GAGGTCGTCG CGGGCATCAA CCGGCTGACG GCGGCGGCGC GCGCGGCGGG CGCGCCCGTC
TGTTTCGTGC AGCACGACGG CGGCGCGGAC GACGACGTCG TGCCCGGCAC GCCCGGTTGG
CGGCTGCACG CGGAGCTCAC GTGCGCCGAC GCCGACTGGC GAATCCGCAA GCGCGCAAGC
GATGCGTTCC ACGGCACGTC GCTTGCCGCG CAACTTGCCG CGCACGGCGT TGACGCGGTC
GTGATCTGCG GCTACGCGTC GGAATTCTGC GTCGATTCGG CGGCGCGCCG CGCGGCGCTC
CTCGGCTATC GAACGACGGT CGTCTCCGAT CTGCACACGA CGAACGATCG CGCTCACCTG
AGCGCGGCGC AAATCGTCGC GCATCACAAT TTCATCTGGA GCCACTGTTC GTTCTCGGGC
AACGGCGTTG CGCCGCGGCC GCTCGACGAG GTGATCGCCG CGGAGCTCGC ATGA
|
|---|
| Protein sequence | MARRAHATDL TGARAPAATS VAGSAASTPT PMSVQVSMPA AGGEWLNDEN GGRCMARAAV
IVVDMQRGLL QRAKPAHRLD EVVAGINRLT AAARAAGAPV CFVQHDGGAD DDVVPGTPGW
RLHAELTCAD ADWRIRKRAS DAFHGTSLAA QLAAHGVDAV VICGYASEFC VDSAARRAAL
LGYRTTVVSD LHTTNDRAHL SAAQIVAHHN FIWSHCSFSG NGVAPRPLDE VIAAELA
|
|---|
| |