| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3574 |
|---|
| Symbol | gph |
|---|
| ID | 3691915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 3897139 |
|---|
| End bp | 3897867 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637730029 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_334939 |
|---|
| Protein GI | 76810923 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.952116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGT CGCCTCTCAA TGGCGCGCCG CGCATCGAAG CGGCGCTCAT CGATCTCGAC
GGCACGATGG TCGATACCGC AGACGATTTC ACGGCCGGCC TGAACGCGAT GCTCGCGCAG
CTCGATGCCG AGGAGACGAC GCGCGAGGAA GTGATGCGCT ATGTCGGCAA GGGTTCGGAG
AACCTGATCC AGTGCGTGCT GACGCCGCGC TTTTCCGCAG ACGACGCGAA CGCGCGCTTC
GACGAGGCGC TCGCGCTCTA TCAGGCCGAA TACGCGAAGA TCAACGGCCG CCACACGCGG
CTCTACCCGG ACGTCGACGC AGGCTTGCGG GCGATGCGTG AAGCGGGCGT CAAGCTCGCA
TGCGTGACGA ACAAGCCGTG CCGGTTCGCG GTCGAGCTGC TCGCGCAGTA CGGCCTGTCC
GGCCATTTCT CCGCGGTGTT CGGCGGCGAC AGCGTGCCGC GCAAGAAGCC CGATCCGGCG
CCGATGCTCG CCGCATGCGC CGCGCTCGGC GTCGCGCCGC GCGCGGCGGT CGCGATCGGC
GATTCGGAGA ACGACGCGCT CGCGGGCCGC GCGGCCGGGA TGGCGACGCT GACGGTGCCG
TACGGCTACA ACCACGGCAA CGCTATACAA ACGATCGAAT CGGATGGTAT AGTCGATTCG
CTTCTCGCCG CCGCACGGCT CATCGCCGCG CACAATTCGG CAGGATCAGC GGCAAGATCA
GCCATCTGA
|
|---|
| Protein sequence | MTTSPLNGAP RIEAALIDLD GTMVDTADDF TAGLNAMLAQ LDAEETTREE VMRYVGKGSE
NLIQCVLTPR FSADDANARF DEALALYQAE YAKINGRHTR LYPDVDAGLR AMREAGVKLA
CVTNKPCRFA VELLAQYGLS GHFSAVFGGD SVPRKKPDPA PMLAACAALG VAPRAAVAIG
DSENDALAGR AAGMATLTVP YGYNHGNAIQ TIESDGIVDS LLAAARLIAA HNSAGSAARS
AI
|
|---|
| |