Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3573 |
Symbol | rpe |
ID | 3691153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 3896402 |
End bp | 3897133 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637730028 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_334938 |
Protein GI | 76810355 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.715981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTTTT TCCGTCTTGC AACGCATCCC ACGCGCCCTC CTCTCATGAC GCAATTCCGC ATCGCCCCCA GCATTCTGTC GGCCGATTTC GCGCGGCTCG GCGAAGAAGT CCGCAATGTC GTCGCCGCCG GCGCCGACTG GATCCACTTC GACGTGATGG ACAACCACTA CGTGCCGAAC CTGACGATCG GCCCGCTCGT CTGCGAGGCG ATCCGCCCGC ACGTGCAGGT GCCGATCGAC GTGCACCTGA TGGTGCGTCC GGTCGACCGG ATCGTGCCGG ATTTCGCGAA GGCGGGCGCG AACCTGATCA GCTTTCACCC GGAAGCGTCG GATCACATCG ACCGCACGCT CGGCCTGATC CGCGATCACG GCTGCAAGGC GGGCCTCGTG TTCAACCCGG CGACGCCGCT CAATTACCTC GATCACGTGA TGGATCGCGT CGATCTCGTG CTGATCATGT CGGTGAACCC CGGCTTCGGC GGCCAGTCGT TCATTCCCGA GGCGCTCAAC AAGCTGCGCG AAGCCCGCGC GCGCATCGAC GCGTACACCG CGCGCACCGG CCGCGAGATC CATCTGGAGA TCGACGGCGG CGTGAAGGCC GAGAACATCG CCGAGATCGC CGCGGCGGGC GCCGATACGT TCGTCGCGGG CTCGGCGATC TTCGGCAAGC CCGACTATCG GCAGGTGATC GGCGAGATGC GCGACGCGCT CGCCACCGTC GGGCGCGCGT GA
|
Protein sequence | MTFFRLATHP TRPPLMTQFR IAPSILSADF ARLGEEVRNV VAAGADWIHF DVMDNHYVPN LTIGPLVCEA IRPHVQVPID VHLMVRPVDR IVPDFAKAGA NLISFHPEAS DHIDRTLGLI RDHGCKAGLV FNPATPLNYL DHVMDRVDLV LIMSVNPGFG GQSFIPEALN KLREARARID AYTARTGREI HLEIDGGVKA ENIAEIAAAG ADTFVAGSAI FGKPDYRQVI GEMRDALATV GRA
|
| |