| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3528 |
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| Symbol | pilC |
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| ID | 3691808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 3844295 |
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| End bp | 3845512 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637729983 |
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| Product | type IV pilus assembly protein PilC |
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| Protein accession | YP_334898 |
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| Protein GI | 76808777 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAC GCGGACCGGC TTCGCCGATC GAGTCCCGAT ACCGTTGGGC GGGCGTGACG
ATCGACGGCG CGCGGCGGCG CGGCATGTTG ATCGCCGTCG ATCCGTCCGC TGCGCGCGCG
GCGCTCAAGC GCACGGGCGT CACCGTGCTG CGCCTCGAAG CGCGCGGCCG GGCGCCGCAG
CCCGCCGCAC GGGCGAGCGA AGTCACCCGT TTCGCGCGGC AGCTCGCGGG ACTCCTGCAC
GCGGGGCTCG CGCTTGCGCC GTCGCTCGAA CTGCTCGCGC AAGCGACGCA GCGAAGCGAA
ATGCCCCGCG TCGCGGCGGG CCTCGCGCGC GAGATCGTGG CGGGACGGCA GTTCTCCGCC
GCGCTGCGCC GCTACCCGCG CCAGTTCGAT CCGTTTTTCT GTCAACTGGT CGCAGTCGGC
GAAACGGCGG GAGCGCTCGC CGCGGTGCTC ACACGGCTCG CCGACGATCG CGAGCGTGCA
GCCGCGCAAT ATGCGCGCGT CAAAGGCGCG CTCGCTTACC CAGCCGCCGT GCTGCTGTTC
GCGCTCGCGA TCACCGCCGC ATTGCTGGTC TGGGTGGTGC CCACGTTCGA ACAGATCTTC
GCGGGCTTCG GCGCCCCGCT GCCTGCGCCG ACCCGTTTCG TCCTCGCGCT GTCGGCCGGC
GTGACGCGCT GGAGCGCGCC TGCCGCCGCG GCCGCGCTAT TCGCCTGCGT TGCCGTTCGC
CATGCGGCGC GCCGTTCCGC AGCCGCGCGC GTCGCGCTCG CACGGACGCT GCTGCGCGCG
CCGTTCGTCG GGCCGCTCGT GCAGACGCTC GCCGCCGCCC GATGGAGCCG CGCGCTCGGC
ACGTTGCTCG CCGCCGGCAC GCCGCTCACC GACGCATTCG CGGCGCTGTC GAACGCGACC
GGCAACCCGC GTTTCGATCT CGCGACAGCC GGCATCGCCG CACGGGTGCT GCATGGCGAA
CGGCTCGCCC GCGCGATGCG CGCCGAAGGC TGCTTCCCTG ACGATCTCGT CCAGCCGATC
GCCGTCGCCG AGGAATCGGG CACGCTGGAC ACAATGCTCA TCGACGCCGC GACACTCTGC
GATCGCCGCG TCGACGAACG GATCAGCGCG CTCGCGAACC TGTGCGAACC CGTCGTGATC
GTCGTGCTGG GCGCGCTGAT CGGCGCGCTC GTCGTCGCGA TGTACTTGCC GATCGTCCAG
CTCGGCAACG TGGTGTAG
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| Protein sequence | MSTRGPASPI ESRYRWAGVT IDGARRRGML IAVDPSAARA ALKRTGVTVL RLEARGRAPQ
PAARASEVTR FARQLAGLLH AGLALAPSLE LLAQATQRSE MPRVAAGLAR EIVAGRQFSA
ALRRYPRQFD PFFCQLVAVG ETAGALAAVL TRLADDRERA AAQYARVKGA LAYPAAVLLF
ALAITAALLV WVVPTFEQIF AGFGAPLPAP TRFVLALSAG VTRWSAPAAA AALFACVAVR
HAARRSAAAR VALARTLLRA PFVGPLVQTL AAARWSRALG TLLAAGTPLT DAFAALSNAT
GNPRFDLATA GIAARVLHGE RLARAMRAEG CFPDDLVQPI AVAEESGTLD TMLIDAATLC
DRRVDERISA LANLCEPVVI VVLGALIGAL VVAMYLPIVQ LGNVV
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