Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3527 |
Symbol | pilB |
ID | 3689416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 3843039 |
End bp | 3844298 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637729982 |
Product | type IV fimbrial biogenesis protein,PilB |
Protein accession | YP_334897 |
Protein GI | 76811526 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCAA CGCCCTCCAA CCCTTCTTTC CCCGCCGTGC GGTCCGCAGC ATCCGCGCTG CCCCGGCCGC GCGCGCCCGA GCTCGCCGAC GACGCACCCG CGGTCGGTAT CGTCGCCGAC ATGCTGCGCG CGGCCCACGA GCGCGATGCT TCCGACATCC ATGTCGAGCC CGGTGAATCC GGCTGGCGCG TGCGTCTGCG CATCGACGGC GTGCTGCACG AGTTCGCGCG GCCGCCCGCT CATTTGCGCG ACGCATGCGT GACGCGCATC AAGGTACTCG CGCGGATGGA CATCGCCGAG CGCCGCGTGC CGCAGGACGG CCGGCTGCGG CTCCCGCTCG CGCCGGGGCG CGCGGGCGAC TACCGCGTGA GCTCGCTGCC GACGCTGCAT GGCGAGAAAC TCGTGCTGCG GCGTCTGGAG ACGCTGCCCG CCGATCTGTC GCTCGCCGCG CTCGGCTTCG ACGCGGCTCA GGCACGCGGC GTCGAGGCGG CGATCGGCGC GCCGCACGGT CTCATCCTCG TCACGGGGCC GACGGGCAGC GGCAAGACGC TGTCACTGTA TTGCTTCCTG CAAATGCTGA ACGACGTGTC GCGCAACGTC TGCACGGTCG AGGATCCGGC CGAGATCGAG CTCGACGGCA TCAACCAGGT CGGCGTGCGC GAGAAGGCGG GCCTCACCTT CGCGGTCGCG CTGCGCGCGT TCCTGCGGCA GGATCCCGAC GTCATCATGG TCGGCGAGAT ACGCGATGCG CAGACCGCCG ACGTCGCGCT GAAAGCCGCG CAGACCGGGC ACCTCGTGCT GTCGACGCTG CACACGAATG ACGCGCCCGC CGCGGTGGCC CGCCTGCTCG ACATCGGCGT CGCGCCGTAC AACCTCGCCG CCGCGCTGCG GCTCGTGACA GCGCAGCGGC TCGTGCGACG CCTGTGCCCC GCTTGCCGCG CGCCGTCGGA CGCGCCGCCC GCCACACTGC GCGCCGCGGG ATTCGACGCC GCGTCGATCG ACGCCGGCTG GCGCCCGTAT GCCGCGAACG GATGCGCCGC ATGCCATGGA ATCGGTTATC GGGGGCGCAT CGGCATCCAT CAGGTGATGC CGCTGTCCGC CGAGTTGCGC AATCTGACCG TCGCGCGCGC GAGCAGCGCC GAACTCGCGC GACAAGCGCG CGCCGAAGGC ATGGCGAGCC TGCGCGATGC GGCACTCGCC CGCGTTCGCG ACGGCACGAC GAGCTTGAGC GAAGCGCTCG CCACGACGGA GGCGGCATGA
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Protein sequence | MSATPSNPSF PAVRSAASAL PRPRAPELAD DAPAVGIVAD MLRAAHERDA SDIHVEPGES GWRVRLRIDG VLHEFARPPA HLRDACVTRI KVLARMDIAE RRVPQDGRLR LPLAPGRAGD YRVSSLPTLH GEKLVLRRLE TLPADLSLAA LGFDAAQARG VEAAIGAPHG LILVTGPTGS GKTLSLYCFL QMLNDVSRNV CTVEDPAEIE LDGINQVGVR EKAGLTFAVA LRAFLRQDPD VIMVGEIRDA QTADVALKAA QTGHLVLSTL HTNDAPAAVA RLLDIGVAPY NLAAALRLVT AQRLVRRLCP ACRAPSDAPP ATLRAAGFDA ASIDAGWRPY AANGCAACHG IGYRGRIGIH QVMPLSAELR NLTVARASSA ELARQARAEG MASLRDAALA RVRDGTTSLS EALATTEAA
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