Gene BURPS1710b_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3519 
Symbol 
ID3690004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3835537 
End bp3836187 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID637729974 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_334890 
Protein GI76811468 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.220968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATC GTGAAGGCTT TCGCCCGAAC GTCGGCATCA TCCTCTTGAA CGCGCACAAC 
GAGGTGTTTT GGGGCAAACG GCTCCGCGAG CATTCCTGGC AGTTTCCGCA AGGGGGCATC
AAGTACGGCG AGACCCCGAT GCAAGCGATG TACAGGGAAC TGCACGAGGA GACCGGGCTG
CTGCCGGAAC ACGTCAAGAT CATCGGCCGC ACTCGCGACT GGTTGCGTTA TGAGGTGCCA
GACAAGTTCA TCAAGCGCGA AGTGCGCGGC CATTATCGCG GCCAGAAGCA GATCTGGTTC
CTGCTGCGAA TGGTCGGCCG CGATTGCGAC ATCTGCCTGC GGGCGACGGA TCATCCGGAG
TTCGACGCGT GGCGCTGGAA CGAATACTGG GTGCCACTCG ACGCGGTGAT CGAGTTCAAG
CGGGATGTGT ATCAGTTGGC GTTGACCGAA CTGTCGCGTT TCCTGCGCCG CCCGGCGCAG
CGCACCGACA AATCGCGCGG CCCGCGCGCG CCGCGCTATC CGCGTGTCGC GAATGGGCAC
GCGGCATCGG AGGCACCGGC CGCGATCGAC ACGTCGGCAG TCTGTTCGGA AGTCGAGCCG
GGCGCGAACG CGCTCGACGA AACCCCTCCC CGCGTGAGTC TGCGCGACTG A
 
Protein sequence
MLDREGFRPN VGIILLNAHN EVFWGKRLRE HSWQFPQGGI KYGETPMQAM YRELHEETGL 
LPEHVKIIGR TRDWLRYEVP DKFIKREVRG HYRGQKQIWF LLRMVGRDCD ICLRATDHPE
FDAWRWNEYW VPLDAVIEFK RDVYQLALTE LSRFLRRPAQ RTDKSRGPRA PRYPRVANGH
AASEAPAAID TSAVCSEVEP GANALDETPP RVSLRD