Gene BURPS1710b_3494 details

Gene Information

• Locus tag: BURPS1710b_3494
• ID: 3689062
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 3809822
• End bp: 3811741
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637729949
• Product: ribonuclease II (RNB) family protein
• Protein accession: YP_334865
• Protein GI: 76811699
• COG category: [K] Transcription
• COG ID: [COG0557] Exoribonuclease R

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCAGG CGGACGAAGC CGCCCAACAG ATCGATCTGG ATTTCCTGTG GGAGTGCGCG 
CCCGCCGAGG AATTCGCGTA TGCCGCGCTC GCCGACGAAT ATTTCGGCGC GAGCTACGGC 
CCCGTCGAGC GCGCGGCGCT CGTGCTGCGC CTGCACGGCG CGCCCGTCTA CTTCCGCCGC 
AAGGGGCGCG GCCAGTATCA GCGCGCGCCC GAGGAGCAGC TGAAAATGGC GCTGGCCGGG 
CTCGAGCGCA AGCGCCAGCA GGCGCTCGTG CAAGCCGGCT ACGAGGAGGA GCTGAAGGCG 
GGCAGGCTGC CCGACGCGTT CGCGGGCAAG GCGCTCGGCC TGCTGACGAA GCCGGACAAG 
AACTCGATCG AATACAAGGC GCTCGATGCG GCGGCGCTCG CGCGCGGCGT GTCGCCGGCG 
CGCCTGATGC TCGACTGCGG CGGCATTCCG TCGGCGCGCG CGCTGCACGA GGCGCGCTTT 
CTCGCCGAAT ACTTCCCGCA CGGCACGGGC TTTCCGGCCG TCGCGGTCGG CAAGCTGCCC 
GAGGATCTGC CGCGCGCGGA CGTCAACGCG TTCTCGATCG ACGACATCAC GACGACCGAA 
ATCGACGACG CGTTCTCCGT CGAGCACCTG TCCGACGGGC GCGTGCGGAT CGGCGTGCAC 
ATCGCGGCGC CCGCGCTCGG CATCGTGCGC GGCGATGCGG TCGACGCGAT CGCGCGCGCG 
CGGCTGTCGA CCGTCTACAT GCCGGGCGAC AAGATCACGA TGCTGCCGGA CGACGTCGTC 
GACGTGTTCA CGCTGAAGGA GGGCGATTAC CGCCCGGCGC TGTCGCTGTA CATCATCGTC 
AAGCGTGACA CGCAGGAAAT CGTCGCGAAC GAGACGCGCG CCGAATACGT CTATGTGAAG 
AGCAACCTGC GGCACAACAC GCTCGACGAG CTCGTCACCG AGGACGCACT CGCGGCGGGC 
ACGGGCGATT ATCCGCACAA GGACGACATC GCGGCGCTCT GGCCGCTCGC GCAGGCGCTC 
TTCGAGCGAC GCCAGGTCGC GCGCGCGGGC TACGGGCTCA AGCGCGAAGT GCAGCGCAAC 
ACCGATTACA ACTTCTACGT CGAAGGCGAG CACGTGTCGA TCACGCCGCG CCGGCGCGGC 
TCGCCGCTCG ATCTCATCGT GTCCGAGCTC GCGATCCTCG CGAACTCGAC ATGGGGCGCG 
TTCCTGCACG ATCACAGCGT GCCGGGCATT TACCGCACGC AGCGCGCGTT CGGCATGCCG 
AGCGGGCCGA AGCGCACGCG CATGCAGACG AGCGCCGCGC CGCACGAGGG GCTCGGCGTG 
CCGCAGTACG CGTGGAGCAC GTCGCCGCTG CGCCGCTACG TCGACCTCGT CAACCAGTGG 
CAACTGCTCG CGTGCGTGCA GCACGGCGTC ACCGCGAAGC TCGCCGCCCC GTTCAAGCAG 
AAGGATGCGG ATCTGTACGC GGTCGTGCAG GGTTTCGACG ACACGTACGC CGCGTACGCC 
GACCACCAGC GCCGGATGGA GTATTTCTGG TGCCTGCGCT GGATCAAGCA GGAAGGCCGC 
AAGCAGGTGA GCGCGACCGT CGTGAAGGGC GAGCTCGTGC GCCTCGACGA AGTGCCGCTG 
CTGCTGCACG TGCCCGCGCT CGGCGTGCAT GCGCGCGGCA CGCGGGTGCT GCTCGACGTG 
ATGTCGGTCG ACGAGCTGAC GATCGAGGCG TCGGTACGGC TCGTGAGCGT GCTCGATGCG 
CCGATGGTGT CGAGCGGCGA GCCGGCCGAC GAAGACGAGG ACGCCGACGC GGCCGACGAG 
ACGCTGCTCG ACGCCGCCGA CGAATCGGCG CAAGGCGAAG CGGAAGCGCT CGCCGAGGCG 
GGCGGCGCGG CGAGCGGCAA CGGCGAATCG TCCGCGAACG GCGAGGAACA ATCGAAATGA 

 

Protein sequence

MQQADEAAQQ IDLDFLWECA PAEEFAYAAL ADEYFGASYG PVERAALVLR LHGAPVYFRR 
KGRGQYQRAP EEQLKMALAG LERKRQQALV QAGYEEELKA GRLPDAFAGK ALGLLTKPDK 
NSIEYKALDA AALARGVSPA RLMLDCGGIP SARALHEARF LAEYFPHGTG FPAVAVGKLP 
EDLPRADVNA FSIDDITTTE IDDAFSVEHL SDGRVRIGVH IAAPALGIVR GDAVDAIARA 
RLSTVYMPGD KITMLPDDVV DVFTLKEGDY RPALSLYIIV KRDTQEIVAN ETRAEYVYVK 
SNLRHNTLDE LVTEDALAAG TGDYPHKDDI AALWPLAQAL FERRQVARAG YGLKREVQRN 
TDYNFYVEGE HVSITPRRRG SPLDLIVSEL AILANSTWGA FLHDHSVPGI YRTQRAFGMP 
SGPKRTRMQT SAAPHEGLGV PQYAWSTSPL RRYVDLVNQW QLLACVQHGV TAKLAAPFKQ 
KDADLYAVVQ GFDDTYAAYA DHQRRMEYFW CLRWIKQEGR KQVSATVVKG ELVRLDEVPL 
LLHVPALGVH ARGTRVLLDV MSVDELTIEA SVRLVSVLDA PMVSSGEPAD EDEDADAADE 
TLLDAADESA QGEAEALAEA GGAASGNGES SANGEEQSK