Gene BURPS1710b_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3461 
SymbolpdhR 
ID3690064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand+ 
Start bp3777669 
End bp3778361 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID637729916 
ProductGntR family transcriptional regulator 
Protein accessionYP_334832 
Protein GI76809928 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.488404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACG TTCCGCATAC CGTCACCGAC GCCGCCATCG CCACGATCCG TGAGCGGATC 
GAGCGCGGCT TCTATCCCGT CGGCAGCCTG TTGCCCGCGC AACGTCAATT GTCCGAAGAA 
CTGAAAATCA GCCGCGCGTC GCTGCGCGAG GCGCTGTCGA CGCTCGAGGC GCTCGGCATG 
CTGCGCATCC GGCCCGGCAA GGGCGTGTAC GTCGAAAGCG CGCAGGCGAG CGCCGCGCAT 
GCGTGGCGCT TCGCCGAGCA GTCTTCGCTG CCCGACACCT ACCAGATGCG CTATGCGCTC 
GAAGGCTTCG CCGCGCGAAT GGCCGCGCTC GCCGTCAGCG AGGAGGATCT CGCGTGGTTC 
GAGGAGAATG TCGCCGCGCT GCAGGAGGCG CTCGCGAACG ACGAGCTCGA TAGCGCATCG 
CAGCTCGATT TCGATTTCCA CATGCGCATC GTCAGCCTCG CCGGCAACGC GGCGATCGAA 
TCGATCCTGC GCGGCAGCGC GGACATCATG AAGGAAAGCC AGCGGATGCC GTTCTATCGG 
CGCGAGCTCG TGCTTTCGAC GTATCGCGAG CATCGCGCGA TTCTCGATGC GCTGATCGCG 
AAGGATCCCG CCGCGGCGGG CGCGGCGATC GAAGCGCACA TCTCGAACGC CGCGCAGCGC 
GCGGGCGTGT TCTTTCCGAC GCCGAAGCGC TGA
 
Protein sequence
MKNVPHTVTD AAIATIRERI ERGFYPVGSL LPAQRQLSEE LKISRASLRE ALSTLEALGM 
LRIRPGKGVY VESAQASAAH AWRFAEQSSL PDTYQMRYAL EGFAARMAAL AVSEEDLAWF 
EENVAALQEA LANDELDSAS QLDFDFHMRI VSLAGNAAIE SILRGSADIM KESQRMPFYR 
RELVLSTYRE HRAILDALIA KDPAAAGAAI EAHISNAAQR AGVFFPTPKR