Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3453 |
Symbol | exbD1 |
ID | 3689221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 3770728 |
End bp | 3771258 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637729908 |
Product | biopolymer ExbD/TolR family transporter |
Protein accession | YP_334824 |
Protein GI | 76811625 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTCG GCGGACTCGA TCACCAGCAC ACGTCGCAGC CGATGGCGGA CATCAACATG ACGCCGCTCA TCGACGTGAT GCTCGTGCTG CTCGTCATCT TCATCATCAC CGCGCCGCTC TTGACGCATG CGATCCGGCT CGATTTGCCG AAGGTCGCGG CCGCGCCCGC GCGCGAGACG CCGGAGACGA TCACGGTGTC GATCGACGCG GCGGGCAAGC TGTACTGGAA CGACGCGCCT GTCGCGCCCG ACGCGCTCGC CGCGCGGTTG CGCGACGTGG TGGCGGCAGG CCAGGACCCG GAGCTGCATC TGCGCGCCGC GCGCGACACC CGCTACGACA CGATCGCGCA GGTGATGGGC GCCGCGCAGC AGGCGGGCGT CGCGCGGATC GGCTTCGTCA CCGACGCGCC CGCGCCGCCG GCCCGGCCGT CGCCGCCGCG CGGCGCACCG CCTTCGCTTT CGCCGCCGGC GTCGCCCCAG GCGCAGCCGC AGCCACCGTC GCCGCCGCCG TCGCCCGCCG CGTCGCGCTG A
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Protein sequence | MAFGGLDHQH TSQPMADINM TPLIDVMLVL LVIFIITAPL LTHAIRLDLP KVAAAPARET PETITVSIDA AGKLYWNDAP VAPDALAARL RDVVAAGQDP ELHLRAARDT RYDTIAQVMG AAQQAGVARI GFVTDAPAPP ARPSPPRGAP PSLSPPASPQ AQPQPPSPPP SPAASR
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