Gene BURPS1710b_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3453 
SymbolexbD1 
ID3689221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3770728 
End bp3771258 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content74% 
IMG OID637729908 
Productbiopolymer ExbD/TolR family transporter 
Protein accessionYP_334824 
Protein GI76811625 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCG GCGGACTCGA TCACCAGCAC ACGTCGCAGC CGATGGCGGA CATCAACATG 
ACGCCGCTCA TCGACGTGAT GCTCGTGCTG CTCGTCATCT TCATCATCAC CGCGCCGCTC
TTGACGCATG CGATCCGGCT CGATTTGCCG AAGGTCGCGG CCGCGCCCGC GCGCGAGACG
CCGGAGACGA TCACGGTGTC GATCGACGCG GCGGGCAAGC TGTACTGGAA CGACGCGCCT
GTCGCGCCCG ACGCGCTCGC CGCGCGGTTG CGCGACGTGG TGGCGGCAGG CCAGGACCCG
GAGCTGCATC TGCGCGCCGC GCGCGACACC CGCTACGACA CGATCGCGCA GGTGATGGGC
GCCGCGCAGC AGGCGGGCGT CGCGCGGATC GGCTTCGTCA CCGACGCGCC CGCGCCGCCG
GCCCGGCCGT CGCCGCCGCG CGGCGCACCG CCTTCGCTTT CGCCGCCGGC GTCGCCCCAG
GCGCAGCCGC AGCCACCGTC GCCGCCGCCG TCGCCCGCCG CGTCGCGCTG A
 
Protein sequence
MAFGGLDHQH TSQPMADINM TPLIDVMLVL LVIFIITAPL LTHAIRLDLP KVAAAPARET 
PETITVSIDA AGKLYWNDAP VAPDALAARL RDVVAAGQDP ELHLRAARDT RYDTIAQVMG
AAQQAGVARI GFVTDAPAPP ARPSPPRGAP PSLSPPASPQ AQPQPPSPPP SPAASR