Gene BURPS1710b_3442 details

Gene Information

• Locus tag: BURPS1710b_3442
• Symbol: edd
• ID: 3689615
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 3760727
• End bp: 3762580
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637729897
• Product: phosphogluconate dehydratase
• Protein accession: YP_334813
• Protein GI: 76808582
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase; [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCACGC TGCACCCCAC TCTTGCGTCC GTCACCGAGC GCGTGATCGC GCGCAGCCGT 
CCGACCCGCC AAGCCTATCT CGCCCGCATC GACGCCGCCC AGGGGCATTT CCCCGCGCGC 
AGCGCGCTGT CGTGCGCGAA TCTCGCGCAT GGCTTCGCGG GCCTGGAGGG CAGCGACAAG 
TTCGCGATCA AGGCGATCCG CGAGCCGAAC ATCGGCATCG TGTCGGCGTA CAACGAGATG 
CTGTCCGCGC ATGCGCCGTA CAAGGGCTTT CCCGACATCA TCAAGGCGGC CGCGCGCGAG 
CGCGGCGGCG TCGCGCAGTT CGCGGGCGGC GTGCCGGCGA TGTGCGACGG CGTCACGCAG 
GGCAACGCGG GGATGGAGCT GTCGCTGTTC TCGCGCGAGG TGATCGCGAT GAGCACGGCC 
GTCGCGCTCA CGCACAACAT GTTCGATGCG GCCCTTTGCC TCGGCATCTG CGACAAGATC 
GTGCCGGGCC TCTTGATCGG CGCGCTGCAG TTCGGCCACC TGCCGACGAT CTTCGTGCCG 
GCCGGCCCGA TGACGAGCGG CCTGTCGAAC GACGACAAGG CGAAGATCCG CCAGCAGTTC 
GCGACAGGCC AGGTGGGCCG CGACGCGCTG CTCGAGGCGG AATCGGCCGC GTACCACGGC 
CACGGCACCT GCACGTTCTA CGGCACCGCG AACAGCAACC AGATGCTGAT GGAAGTGATG 
GGGCTGCATC TGCCGAGCGC CGCGTTCGTT CATCCGCACA CGCCGCTGCG CGACGCGCTG 
ACGGCCGAGG CCGCGCGCCG CGTGCTCGAG CTCACGGCCG AGCGCGGCCA ATACACGCCG 
ATCGGCCATG TGATCGACGA GCGCGCGATC GTCAACGGCA TCGTCGCGCT GCTCGCCACC 
GGCGGCTCGA CGAACCACAC GCTGCACCTC GTCGCGATCG CGCGCGCGGC GGGCATCCTG 
ATCGACTGGG ACGATTTCGA CGCGCTGTCG GCCGCGGTGC CGCTTCTCGC GAAGATCTAC 
CCGAACGGCA AGGCCGACGT GAACCATTTC CACGCGGCGG GCGGCATCGC GTTCCTCGTG 
CGCAACCTGC TTGAAGGCGG TCTGCTGCAC GAAGACGTGA CGACGGTCGC GGGCAAGGGC 
CTTGCGCATT ACACGAAGGA GCCGCGCCTG ATCGACGGCA AGCTGACGTG GGTCGACGGC 
GTCGGCGAGA GCGCCGACGA CAAGGTGCTG CGCCCGATCG CCGCGCCGTT CCAGCCGGAC 
GGCGGGCTGC GCCTGATGCA GGGCAGGCTC GGGCGCGGCG TGATCAAGAT TTCGGCGGTT 
GCGCCCGAGC ACCGCAAGGT GACGGCGCCT GCGATCGTGT TCGATTCGCA GGAAGCCGTG 
CAAGCCGCGT TCGACGCGGG CGAGCTCAAG CGCGATTTCG TCGCGGTCGT GCGCTTCCAG 
GGCGCGCGCG CGAACGGGAT GCCGGAACTG CACCGGCTGA CGCCGCTGCT CGGCGTGTTG 
CAGGATCAGG GTTTTCGCGT CGCGCTCGTG ACGGACGGCC GGATGTCGGG CGCGTCGGGC 
AAGGTGCCGG CCGTGATCCA CGTGTCGCCC GAGGCGCTGT TGAGCGGCCC GCTCGGCAAG 
GTATGCACGG GCGACACGAT CGTGATCGAC GCGCAAGCGG GCGTGCTCGA CGTCGAGATC 
GACGAGCAAG CGTGGGCCGC GCGCGCGGTC GCGCAGCCCG CGCATCAGGC GGAAAACGAA 
GTCGGCTTCG GCCGCGAACT GTTCGGCGTG TTCCGCGCGG CGGCCGCGCC GGCGGAGCAG 
GGCGCGTCGG TGTTCGGCGC GTCGGTGGGC GAAGCGGCCC ACGTCACCGC ATAA 

 

Protein sequence

MATLHPTLAS VTERVIARSR PTRQAYLARI DAAQGHFPAR SALSCANLAH GFAGLEGSDK 
FAIKAIREPN IGIVSAYNEM LSAHAPYKGF PDIIKAAARE RGGVAQFAGG VPAMCDGVTQ 
GNAGMELSLF SREVIAMSTA VALTHNMFDA ALCLGICDKI VPGLLIGALQ FGHLPTIFVP 
AGPMTSGLSN DDKAKIRQQF ATGQVGRDAL LEAESAAYHG HGTCTFYGTA NSNQMLMEVM 
GLHLPSAAFV HPHTPLRDAL TAEAARRVLE LTAERGQYTP IGHVIDERAI VNGIVALLAT 
GGSTNHTLHL VAIARAAGIL IDWDDFDALS AAVPLLAKIY PNGKADVNHF HAAGGIAFLV 
RNLLEGGLLH EDVTTVAGKG LAHYTKEPRL IDGKLTWVDG VGESADDKVL RPIAAPFQPD 
GGLRLMQGRL GRGVIKISAV APEHRKVTAP AIVFDSQEAV QAAFDAGELK RDFVAVVRFQ 
GARANGMPEL HRLTPLLGVL QDQGFRVALV TDGRMSGASG KVPAVIHVSP EALLSGPLGK 
VCTGDTIVID AQAGVLDVEI DEQAWAARAV AQPAHQAENE VGFGRELFGV FRAAAAPAEQ 
GASVFGASVG EAAHVTA