| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3440 |
|---|
| Symbol | gntT |
|---|
| ID | 3690384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 3758498 |
|---|
| End bp | 3759859 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637729895 |
|---|
| Product | GntP family high-affinity gluconate permease |
|---|
| Protein accession | YP_334811 |
|---|
| Protein GI | 76812140 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGCTG TCCAAGGCAG CATGCTGCTG ATTTACACCG TGATCGCGAT CGCGGTGCTG
ATCCTGATGA TCGCGCGCTA CAAGGTGTAT CCGTTCCTTG TGCTGATCAT CGTGTCGCTC
GGTCTCGGCC TCGCGGTCGG CATGCCGATG GACAAGATCG TGAAATCGTT CGAGGGGGGC
ACGGGCGGCA CGCTCGGCCA CATCGCGATC GTCGTCGGCC TCGGCACGAT GCTCGGCAAG
ATGATGGCCG AATCGGGCGG CGCCGAGCGG ATCGCGACCA CGCTGATCGA CTGGTTCGGC
GAGAAGAACA TCCACTGGGC GATGATGTTC GTCGCGATCA TCGTCGGGCT GCCGGTGTTC
TTCGAAGTCG GCTTCGTGCT GCTGATCCCG ATCGCGTTCA ACGTCGCGAA ACGCACCGGC
AAGTCGCTGC TCGTCGTCGG GCTGCCGATG GTGGCGGGCC TGTCGGTCGT GCACGGGCTG
ATTCCGCCTC ACCCGGCGGC GCTCCTCGCC GTTCAGCAAT ACGGCGCCGA CATCGGCAAG
ACGATCGCGT ACGGCCTCAT CGTCGGCGTG CCGACCGCGA TCGTCGCGGG GCCGCTGTTC
GCGCTCACGA TCTCGAAGTT CGTGAAGCTG CCGGAGCACA ATCCGCTCGC GTCGCAGTTC
GTCGAGACGC GCGCGGCGGG CGAGACGCGC GAGCTGCCGA GCTTCGGCAT CACGCTGTTC
ACGATCCTGC TGCCCGTCGT GCTGATGCTC GTCGGCAGCT GGGCCGATCT CGTGTTCGCG
CCGAAATCGC TGCCGAACAG CCTGCTGCGC TTCGCCGGCA ATTCGGATGT CGCGCTCCTG
ATCGCCGTGC TCGTGAGCTT CTTCACGTTC GGCAAGCTGC AGGGCTTCAA TCGCGAGCAG
ATCCAGAAGT TCTGCGGCGA TTGCCTCGCG CCGATCGCGG GCATCACGCT GATCGTCGGC
GCGGGCGGCG GCTTCGGCGG TATTCTGCGC GACAGCGGCA TCTCGCAGCA GATCGTCGCG
ACCGCGACGC ACGCGCATCT GTCGCCGCTG CTGCTCGGCT GGTTCGTCGC GGCGCTGATC
CGTCTCGCCA CGGGTTCGGC CACCGTCGCG ATGACGACCG CCTGCGGGAT CGTCGCGCCG
ATCGCCGCGG CCTCGGGCGT CACGGTGCGC CCGGAGCTGC TCGTGCTCGC GACGGGCTCG
GGCTCGCTCA TCTTCTCGCA CGTGAACGAC GGCGGCTTCT GGCTGATCAA GGAATATTTC
GGGATGACCG TGGGGCAGAC GTTCAAGACG TGGACGCTGC TCGAAACGAT CATCTCGGTG
CTCGGTCTCA CCTTCACGCT GGCGCTGAGC GCGGTTCTGT AA
|
|---|
| Protein sequence | MGAVQGSMLL IYTVIAIAVL ILMIARYKVY PFLVLIIVSL GLGLAVGMPM DKIVKSFEGG
TGGTLGHIAI VVGLGTMLGK MMAESGGAER IATTLIDWFG EKNIHWAMMF VAIIVGLPVF
FEVGFVLLIP IAFNVAKRTG KSLLVVGLPM VAGLSVVHGL IPPHPAALLA VQQYGADIGK
TIAYGLIVGV PTAIVAGPLF ALTISKFVKL PEHNPLASQF VETRAAGETR ELPSFGITLF
TILLPVVLML VGSWADLVFA PKSLPNSLLR FAGNSDVALL IAVLVSFFTF GKLQGFNREQ
IQKFCGDCLA PIAGITLIVG AGGGFGGILR DSGISQQIVA TATHAHLSPL LLGWFVAALI
RLATGSATVA MTTACGIVAP IAAASGVTVR PELLVLATGS GSLIFSHVND GGFWLIKEYF
GMTVGQTFKT WTLLETIISV LGLTFTLALS AVL
|
|---|
| |