Gene BURPS1710b_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3432 
SymbolgltK 
ID3690945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3749216 
End bp3749893 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID637729887 
Productglutamate/aspartate ABC transporter, permease protein 
Protein accessionYP_334803 
Protein GI76810556 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00338624 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCAGT TCGACTGGAG TAGTATCCCC GGCGCGCTGC CGACGCTCTG GACGGGCGCG 
GTCGTCACGT TCAAGATCAC GCTGCTCGCG ATCGTGATCG GCATCGTCTG GGGCACGTTG
CTCGCGCTGA TGCGCCTGTC GGGCGTGAAG CCGCTCGCGT GGTTCGCGCA GGGCTACGTC
ACCGTGTTCC GCTCGATCCC GCTCGTGATG GTGCTGCTGT GGTTTTTCCT GATCGTGCCG
CAGTTGCTGC AGGGCGTGCT CGGGCTGTCG CCGACGATCG ACATCCGGCT CGCCTCGGCG
ATGGTGGCGT TCTCGCTGTT CGAGGCCGCG TATTATTCGG AGATCATCCG CGCGGGCATT
CAGGCGGTGC CGCGCGGGCA GGTGAACGCC GCGTTCGCGC TCGGCATGAA CTATGCGCAG
GCGATGCGCC TCGTGATCCT GCCGCAGGCG TTTCGCGCGA TGGTGCCGCT GCTGCTCACG
CAGGCGATCG TGCTGTTCCA GGACACGTCG CTCGTCTACG TGATCAGCCT CGCGGACTTC
TTCCGCACAG CCGCGAACAT CGGCGATCGC GACGGCACGA GCGTCGAGAT GATCCTGTTC
GCGGGCGCAT GCTATTTCGT CGTGTGCTCG GTCGCATCCG CGTTGGTCAA AGGTCTCCAG
AAAAAGGTCA CAAGATGA
 
Protein sequence
MHQFDWSSIP GALPTLWTGA VVTFKITLLA IVIGIVWGTL LALMRLSGVK PLAWFAQGYV 
TVFRSIPLVM VLLWFFLIVP QLLQGVLGLS PTIDIRLASA MVAFSLFEAA YYSEIIRAGI
QAVPRGQVNA AFALGMNYAQ AMRLVILPQA FRAMVPLLLT QAIVLFQDTS LVYVISLADF
FRTAANIGDR DGTSVEMILF AGACYFVVCS VASALVKGLQ KKVTR