| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3426 |
|---|
| Symbol | gatC |
|---|
| ID | 3688790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 3744034 |
|---|
| End bp | 3744984 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637729881 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_334797 |
|---|
| Protein GI | 76810231 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000096864 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTACTCCC CCGCCAGCCT CAGCCGCACC CGCGATATGT GCCAACTCTT CGGAATGAAC
TGCGCCGAAC CGACGGACGT GACGTTCTCG TTTACCGGCT TCGCGGCCCG CGGCGGGCTC
ACCGATCATC ATGCCGACGG CTGGGGCATC GCGTTCTTCG AGGACAAGGC CTGTCGCCTC
TTCATCGACC AGCAGTCGTC GTCGACGTCG CCCATCGCCG AGATGGTCAA GCGCTACCCG
ATCAAGTCGA AGAACACGAT CGCGCACATC CGCAAGGCGA CGCAGGGGCA TATCCTGCTC
GAGAACTGCC ATCCGTTCAT GCGCGAGCTG TGGGGCCGCC ACTGGATCTT CGCGCACAAC
GGCGATCTGC AGAGCTACGT GCCCGACCTC GAAGGCGGCG TCTATCAGCC GGTCGGCACG
ACCGACAGCG AGAAAGCGTT CTGCAAGCTG ATGCAGGGCC TGCGCGAAGC GTTTCCGAGC
GCGCAGCCGC CGCTGCCCGA ACTGTTCGAG CAGATCGGCG AGCTCACGCG CGACATCACG
CGGCACGGCG TATTCAATTT CCTGATGTCG AACGGGCAGG CGCTGTTCGC GCACTGCTCG
ACGCGCCTGC ACTACCTCGT GCGGCGCTGG CCGTTCTCGA CCGCGCATCT GATCGACGAA
GACATCTCGA TCGATTTCGC GAAATACACG ACGCCTGAGG ATCGTGTCGC GGTGATCGCA
ACGCAGCCGC TCACCGACGA CGAAGTGTGG ACCGCGCTCG AGCCGGGCGA ACTCGTGATG
TTCCAGTGCG GCGACGTCGC GGCAACGATG CGCATCCCGG TGCCGGAGGC CGTGCTCGAG
AAGCTGCGCA ACCCGGCGTT CGACGCCTCC GCGTCGGCGC CGCGCCGGTC GCCCGCGCTC
GCGGCGAGCG GCGCGGGCGA CGATCTCGGC GACGATCCGG TCGACTTCTG A
|
|---|
| Protein sequence | MYSPASLSRT RDMCQLFGMN CAEPTDVTFS FTGFAARGGL TDHHADGWGI AFFEDKACRL
FIDQQSSSTS PIAEMVKRYP IKSKNTIAHI RKATQGHILL ENCHPFMREL WGRHWIFAHN
GDLQSYVPDL EGGVYQPVGT TDSEKAFCKL MQGLREAFPS AQPPLPELFE QIGELTRDIT
RHGVFNFLMS NGQALFAHCS TRLHYLVRRW PFSTAHLIDE DISIDFAKYT TPEDRVAVIA
TQPLTDDEVW TALEPGELVM FQCGDVAATM RIPVPEAVLE KLRNPAFDAS ASAPRRSPAL
AASGAGDDLG DDPVDF
|
|---|
| |