Gene BURPS1710b_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3378 
Symbol 
ID3689720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand- 
Start bp3699770 
End bp3700393 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID637729833 
ProductYceI, base-induced periplasmic protein 
Protein accessionYP_334749 
Protein GI76809738 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTCGAC CGCGACGGCG TGCTGTCGCG GATGCTTCCC TTCCTCAAAT AACAAGGACC 
GTTATGAAAG TCTCGTTCTA CCGCTACATG CTCGCGGCGT TCGCCGCCGC CTCGGTCGTC 
GTGTCGGGCG CCGCGCTCGC GCAGGTCGAT CTCGCGAAGA GCAAGGTATC GGCCGTCTCG 
AAGCAGATGA ACGTGCCGAC GGAAGGCGTG TTCAAGAAGT TTTCCGCGCA GATCAAGTTC 
GATCCGGCGA AGGCCGCGCA GGGCAGCGCG CAGATGACGA TCGACGTCGC GAGCTATGAT 
CTCGGCGACC AGATGTACAA CGATCAGGTC GCGGGCAAGG ACTGGTTCGA CGCGAAGGCA 
TACCCGCAGG CGAGCTTCGT GTCGACCGCG ATCGCGCCGG CGGGCGGCAA CAAGTACAAC 
GTGTCCGGCA AGCTGACGAT CAAGGGCAAG ACGGTGCCCG TGACCGTGCC CGTGACGGTC 
ACGCAGAACG GCGCCGCGCA GGTGTTCGAC GGCGTGCTGC CGATCAAGCG CTCGACGTTC 
AACGTCGGCA CGGGCGAATG GAAGGACACC TCGGTCGTCG CCGACGAAGT GCAGATCAAG 
TTTCACATCG TCGCCGCGAA GTAA
 
Protein sequence
MVRPRRRAVA DASLPQITRT VMKVSFYRYM LAAFAAASVV VSGAALAQVD LAKSKVSAVS 
KQMNVPTEGV FKKFSAQIKF DPAKAAQGSA QMTIDVASYD LGDQMYNDQV AGKDWFDAKA 
YPQASFVSTA IAPAGGNKYN VSGKLTIKGK TVPVTVPVTV TQNGAAQVFD GVLPIKRSTF 
NVGTGEWKDT SVVADEVQIK FHIVAAK