Gene BURPS1710b_3303 details

Gene Information

• Locus tag: BURPS1710b_3303
• Symbol: wcbA
• ID: 3690552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 3616430
• End bp: 3618445
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637729758
• Product: WcbA
• Protein accession: YP_334674
• Protein GI: 76809422
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3563] Capsule polysaccharide export protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.334534
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGAT CCACCGCATC GCGTCGGAAC TGGTCAAACA CCTTACTGCA TCCGGTTCGC 
GTCCTGTGCA GGCAACGGCC AAAGCGCTCG TCGGACACCG ACCGCGAGTA CATTTGGATA 
GACCGGAAAA TCGGCCGAAT GGCACTGAGT ATCGCGCACT CCTGCGGCGC CCGGACTCGT 
GCCGCATGGC CCGGTCCGAT CTGGGCGGAA GTACCGGCCG GAACGCCGCT TCTCTCATGG 
TTCGTTGTAC CGGTCACCCA CGCCGGACCG GATGCATTCG TGCAAGCGCT CGATGCGGCA 
CTCGAGCAAG ACTGTACTGC GGGCACCGCA GCGGCCGTTG CCGAGTTGAT GAAACGCGTG 
CTCGCCAGTC ACGCAATACG AGGCCGCGAC GGGGTGTCGG AATTTCGTGC GCCCCCTCGG 
CTGCCCGGCG AAACCCGCGT GTTGCTGATC GACGAGCGCA AGTATTCGCA AGGGATCGGC 
GCCGTCGCGA CGCGCAACAA CCGTGGCGCG TTCGAGCGGA TGATCCGGGC TGCCCGCGCG 
GCCCATCCAA ATGCCGAATT TTGGCTCGCC CGCACGAGAG ATCGTGGCTC CGGTATGTGG 
CTATCGGCGT CCGCGGCCGA CATCCTCCCT GCCGACATAC ACCGCCTGGG TGAACACGAA 
TCGCTATGCG CCGCGCTGGA GCACGTCGAC CACGTCTACA CGGTGGGCGC CTCCGAGGGA 
ATGCAGGCGC TGCTGGCCGG CCGGCGAGTG CATGTGTTCG GCGCGCCATA CTATGCCGGC 
TGGGGCCTGA CCGACGATGC CGTTCAGTTG CCCGGTCGCC ACGCGCGGCC CACACTCGCG 
GCGTTGTTCG ATGTCGTCTT TCTGCGCTTT GCCCGCTACC TGAATCCCGC CACGCACGCG 
CCCGGCCGCA TCGACGATCT ACTCGACGCG ATCGAATGGC AGAACACCGT TCGCCGGCGA 
TTCGCCGATC TGCGGCAGGT GGCCGGCATA CGCTTCCAAT GGTGGAAGCG CCCATTCGCC 
ACCCCATATC TCACGGCCGG GGGCGGAACG CTGAGGTGGA CTCGCGACGC AAGCCGTCTG 
CGCGAAGGGG AGCACGCCGC GCTCTGGGGG GCACGCGGCA CGAACGACTT GCCCCCCGGC 
ACAAGGGTCA TACGCATCGA AGACGGATTC CTGCATTCGA CCGGCCTCGG CTCGGACCAC 
GTGGCGCCGT GCAGCCAGGT CATCGATCGA AGCGGCCTCT ATTTCGATCC GAGCCGGCCG 
AGCGATCTCA CGACCATTCT GAACGAAACC GACTTCGACG ATGCCGAACT GGTCCGGGCG 
AACAGGCTAC GCCGCGAAAT CGCCCGCCTG GGCCTGACCA AGTACAACCT CGGTCGCCGC 
AAACCGGCAT GGTCCCCTCC TCCGGGCAAG CGCGTGGTAC TCGTACCCGG TCAGGTGGCG 
GACGATGCCT CCATCCGGCT CGGCACGCGC GGCATTACGA CCGCGGAAGA TCTCCTTCGT 
GAGGTTCGCG CCAGGCGCCC GGACGCCTTC ATCGTCTACA AGCCTCACCC GGACGTCCTG 
TCGGGCAATC GCCGGGGGGC AATCGAGGTG AATGCATGGG CCGACCTGAT CGAACAGGAT 
GCCGATCTGA TCTCGCTGAT AGAAGTGGCC GACGAGATCC ACACCCTTTC GTCGCTGTCC 
GGCTTCGAAG CGCTGATCCG CGGCAAGGCC GTGCATACCT ATGGTCTGCC GTTCTATGCA 
GGATGGGGGC TGACGCAGGA CGCGCTCGCG CAACCCTGGC GCAAGCGCAC GCTTTCTCTT 
GATATGCTGA CAGCCGGCGT GTTGCTGCGC TATCCGGTCT ACTGGGATTG GTCTCTCCGG 
CTGTTCGCCT CGCCCGAACT CGTTGTTCGG CAACTGGCCA TTCCGGCCGC GCGACCGCTG 
ACGAGTATCC GCGGCGATCG CCTGCGGCCG GTTCGGAAAG CATCCCGCTG GATTGCAAGC 
TGTCTGCGCC ATCTCCTCTG GCAATGCGGA AAGTAG 

 

Protein sequence

MTRSTASRRN WSNTLLHPVR VLCRQRPKRS SDTDREYIWI DRKIGRMALS IAHSCGARTR 
AAWPGPIWAE VPAGTPLLSW FVVPVTHAGP DAFVQALDAA LEQDCTAGTA AAVAELMKRV 
LASHAIRGRD GVSEFRAPPR LPGETRVLLI DERKYSQGIG AVATRNNRGA FERMIRAARA 
AHPNAEFWLA RTRDRGSGMW LSASAADILP ADIHRLGEHE SLCAALEHVD HVYTVGASEG 
MQALLAGRRV HVFGAPYYAG WGLTDDAVQL PGRHARPTLA ALFDVVFLRF ARYLNPATHA 
PGRIDDLLDA IEWQNTVRRR FADLRQVAGI RFQWWKRPFA TPYLTAGGGT LRWTRDASRL 
REGEHAALWG ARGTNDLPPG TRVIRIEDGF LHSTGLGSDH VAPCSQVIDR SGLYFDPSRP 
SDLTTILNET DFDDAELVRA NRLRREIARL GLTKYNLGRR KPAWSPPPGK RVVLVPGQVA 
DDASIRLGTR GITTAEDLLR EVRARRPDAF IVYKPHPDVL SGNRRGAIEV NAWADLIEQD 
ADLISLIEVA DEIHTLSSLS GFEALIRGKA VHTYGLPFYA GWGLTQDALA QPWRKRTLSL 
DMLTAGVLLR YPVYWDWSLR LFASPELVVR QLAIPAARPL TSIRGDRLRP VRKASRWIAS 
CLRHLLWQCG K