Gene BURPS1710b_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3299 
Symbolwzm 
ID3690191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3611516 
End bp3612298 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content53% 
IMG OID637729754 
Productcapsule polysaccharide export inner-membrane protein 
Protein accessionYP_334670 
Protein GI76809237 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0262982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATT TCGGTCGATC GTTGGCGGTT CAGCGAAGAG TGATATTCGC ATTGCTGATG 
CGGGAAGTCC TGACCCGGTA CGGGCGTCAC AACATCGGAT TCCTGTGGCT ATTTGTCGAG
CCGATGATCT TCACGGTCGG GATTACCATT CTTTGGAATG CGACAGGAGC GACTCACGGG
TCGAATCTCC CTATTTCCGC GTTTGCTTTG ACCGGCTATT CGACGGTGTT GCTTTGGCGA
AACATGCCCG GGCGGTGCAG TATGGCGGTC ACGCCGAATT TGGCGCTGAT GTATCACCGA
AATGTCAAGG TCATAGATAT TTTTATTGCT CGTATTCTGT TGGAGGTGGT CGGTAATACC
GCATCCTTTT TCGTGTTGAT GATTACATTT CATGCGCTGG GCCTCGTTGA CTATCCCGAG
GATATTCTCG AGGTGATGTT TGCCTGGGTC ATGATTATCT GGTTTGGTGC GTCGCTTGGT
TTCATCATTG GAGCGTTAAG CGAGAAGACG GAGCTCGTCG AGAAGCTTTG GCATCCGGTG
ACCTATCTGA TGTTTCCGCT ATCGGGCGCC ATCTTCATGG TGGATTGGCT TTCGCCGGCA
TTTCAAAAAA TCGTCCTGTG GCTGCCCATG GTGCACGGAG TCGAAATGCT TCGCGAAGGG
TACTTCGGCA GCCTCGTCGC GGCACATTAT GATATCGGAT ATATGGCGTG CGCTTGCCTG
GCGATGTCTC TGGTCGGTCT CGCGCTGGTT CGCGACGTGG GTCGTGAGGT CACGCCAGAA
TGA
 
Protein sequence
MTNFGRSLAV QRRVIFALLM REVLTRYGRH NIGFLWLFVE PMIFTVGITI LWNATGATHG 
SNLPISAFAL TGYSTVLLWR NMPGRCSMAV TPNLALMYHR NVKVIDIFIA RILLEVVGNT
ASFFVLMITF HALGLVDYPE DILEVMFAWV MIIWFGASLG FIIGALSEKT ELVEKLWHPV
TYLMFPLSGA IFMVDWLSPA FQKIVLWLPM VHGVEMLREG YFGSLVAAHY DIGYMACACL
AMSLVGLALV RDVGREVTPE