Gene BURPS1710b_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3296 
SymbolwcbH 
ID3691243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3605218 
End bp3607014 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content57% 
IMG OID637729751 
ProductWcbH 
Protein accessionYP_334667 
Protein GI76810094 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0341836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTG CATTCTTTAC GCCGTTTCAT CCGGCATGCG GCCCCGGCTT CATGTCGAAG 
GCCGTTGTCG AACATCTGAA AGACTATTTT GATGTTACGG TCTTCTATCA ATGGCACGCT
CTACATCAGC CTTACGAGGT TGAAGACGTC AGCGTTCGTA TCATCGAAGA CGATATGGAC
ATGGAGCCTG TCGCCCGGGA GTTCGACGCG GTAATTTACA ACCTGGGCAA CAATGAAGAG
AACCACTACT CTATCTTCCA GTGCCTGAAG AGGTTGCCGG GTATCGTCGT GCTGCACGAT
TTCGTGATGC AGCACGGGAT CGTCAACGAC CTGTTCAATC GTAAACAAAA ATCCGATCTG
TACTATTGGT TGCTGGCGGC GCTGTACGGA AAGGACGGCG TGCGGGCGTG TCATGCCAGT
GCGCTGAGTT ATGCGGGAGG TGTGCGCGGC GGGTGGGATT CGTCGTCGGT GGCCTCGTTT
CCGATGTTCG AGGTGTTTTC CGGGCTCGCG TCGGCGTGTG TGGTGCATTC GAAATTCTTC
GAGAACCAGT TGAAACCGCA CTTCGCCGGT CCGATTCTCA TGACGCGGAA TCCATACGAT
CTCAAACGTG TGCCTACCGA AGACGTGATC GAAACCTTCT ACAAGGTTCG CGGGAAAGCG
GGTGGGAAAG TCGTTTTTGC TGCGTTCGGT CATATGTCGC CGAGCAAGTG TATCGACCGG
GTCCTGCGCG TCTTCGGCCA CTCGGAGCGA CTCAGGAAGG AAGCCCGGCT CATTCTCTGC
GGTGGCGCCT CGCCCGAATA CGATCAGTAT CTGCGGCGCC TGTGCGCCGA CGGCGATCTC
GGTCATTGCG TCGAGTTTCG CGGTTCGGTC AGCGATACCG AGCTGTATGC GCTTCAGGTC
GAGGCCGATG TATTCGTCAA CCTCCGGCAG CCCAACACCG AGGGGCAGTC GGGATCGTTG
ATCGAACAGC TCGCGGCCGG CAAGCCGGTG ATCTGCTACG ACACGGGTTG TTATGGCGAT
CTGAGTGAAG ACGTCGCGTA TAAAGTACAT AGCACGACCG ATTTCAACGA ACTTCAGCGT
GTGTTCGAGC GTCTCCTAAA TGGTGTTGCC GAGCGTCGAG AAGTGGGGTT GCGAGGCCGT
GCGGCGGCAC TGGAGTACGA TTGTGCGCGT TATGCGCGCG ACATGTTCGA GTTTGTCTTT
GAGAATCGCG AGTATTTGAA GGCGTTCCAG CGGCGGAATT TCGACGGATT GCGGCCTCTG
GGTGTGTCCG GCGCCACCAT CGATACGCGC CATCCCGAAA ACTATTCGAG GACGCAATCC
ATCTGGGGGG TGCTGGACGG CTTCGTTCAC CATGCGTCAT CGGAGGCGCT TTCCCTGATC
CCCGGGGATG CGCGACATCA CTACCTGTCC TTTTTGACCC AGCCGTATCG GCCGTTGATC
GACAGCCTCC TGGAATTGTC GGCGAGCGAT GTTCCGGAAG TGGAACTGGA GGCGGACGGG
ACGTCGTTGT ATTCGACTGC ATCGGCCCCG GTGCTGAACA CGTCGTTCTG GACAAAGTTG
AAATGTCCGG TCAGCGAGCA CTTCGCTTAT ATCGGCTACA AGAAACTACT GTGTCGCGAT
CCGGACCTTG CCGGTCTTCG CGACTATGCG GAGAAGTTGG CGTCGGAAAC GATATCGAGG
AAGGAAATGA TTCTGGCCAT GCTCCGCTCC ACCGAGTTTG CGGAGCGCTT TGGCGACATT
CGGAAAAGCA GCGACTACGT CAGCCTTATC CGCTGGGCAG GCGCTCAAGT TGCCTAA
 
Protein sequence
MKLAFFTPFH PACGPGFMSK AVVEHLKDYF DVTVFYQWHA LHQPYEVEDV SVRIIEDDMD 
MEPVAREFDA VIYNLGNNEE NHYSIFQCLK RLPGIVVLHD FVMQHGIVND LFNRKQKSDL
YYWLLAALYG KDGVRACHAS ALSYAGGVRG GWDSSSVASF PMFEVFSGLA SACVVHSKFF
ENQLKPHFAG PILMTRNPYD LKRVPTEDVI ETFYKVRGKA GGKVVFAAFG HMSPSKCIDR
VLRVFGHSER LRKEARLILC GGASPEYDQY LRRLCADGDL GHCVEFRGSV SDTELYALQV
EADVFVNLRQ PNTEGQSGSL IEQLAAGKPV ICYDTGCYGD LSEDVAYKVH STTDFNELQR
VFERLLNGVA ERREVGLRGR AAALEYDCAR YARDMFEFVF ENREYLKAFQ RRNFDGLRPL
GVSGATIDTR HPENYSRTQS IWGVLDGFVH HASSEALSLI PGDARHHYLS FLTQPYRPLI
DSLLELSASD VPEVELEADG TSLYSTASAP VLNTSFWTKL KCPVSEHFAY IGYKKLLCRD
PDLAGLRDYA EKLASETISR KEMILAMLRS TEFAERFGDI RKSSDYVSLI RWAGAQVA