Gene BURPS1710b_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3293 
SymbolwcbK 
ID3691137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3602403 
End bp3603416 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content59% 
IMG OID637729749 
ProductWcbK 
Protein accessionYP_334665 
Protein GI76810339 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.402008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC GTGTTTTGAT TACTGGTATT ACGGGGATGG TGGGGTCGCA TCTGGCCGAC 
TTTCTGCTGG AGAATACGGA TTGGGAAATC TACGGCCTGT GCCGTTGGCG CAGCCCGCTC
GACAACGTTT CTCACCTGCT TCCGCGTATC AACGAGAAGA ACAGGATCCG CCTGGTGTAC
GGCGATTTGC GCGATTACCT CTCTATTCAC GAGGCCGTCA AGCAGTCGAC GCCCGATTTC
GTGTTCCACC TGGCCGCGCA AAGCTACCCG AAAACCAGCT TCGATTCGCC GCTCGACACG
CTGGAGACCA ACGTCCAGGG AACGGCCAAC GTGCTGGAAG CGCTGCGCAA GAACAACATC
GACGCCGTCA CGCATGTTTG CGCGTCGTCC GAAGTGTTCG GGCGGGTGCC CCGCGAAAAG
TTGCCGATCG ATGAAGAGTG CACGTTCCAT CCGGCATCGC CGTATGCCAT CTCCAAGGTG
GGTACGGACC TGATCGGCCG GTACTATGCC GAAGCGTACA ACATGACCGT GATGACCACG
CGGATGTTCA CGCATACCGG CCCGCGTCGT GGCGACGTGT TTGCCGAATC GACGTTTGCC
AAGCAGATCG CGATGATCGA GCGCGGGCTG ATTCCGCCGG TCGTGAAGAC TGGCAACCTC
GACTCGCTGC GCACGTTTGC CGACGTACGA GATGCGGTAC GCGCGTATTA CATGCTCGTG
ACGATCAACC CGATTCCGGG CGCCTATTAC AACATTGGCG GCACGTATTC CTGCACGGTC
GGCCAGATGC TCGACACGCT GATCTCCATG TCGACTTCCA AGGACGTCAT CCGCGTCGAG
ACGGATCCGG AGCGGCTGCG CCCGATCGAT GCGGATCTGC AAGTTCCGAA CACGCGGAAA
TTCGAGGCCG TCACCGGTTG GAAGCCCGAG ATTTCGTTCG AGAAGACCAT GGAAGATCTG
CTGAATTACT GGCGCGCCCG GATTTCCGCC GGCGAGAAGT TCTTGACCCG ATAG
 
Protein sequence
MAKRVLITGI TGMVGSHLAD FLLENTDWEI YGLCRWRSPL DNVSHLLPRI NEKNRIRLVY 
GDLRDYLSIH EAVKQSTPDF VFHLAAQSYP KTSFDSPLDT LETNVQGTAN VLEALRKNNI
DAVTHVCASS EVFGRVPREK LPIDEECTFH PASPYAISKV GTDLIGRYYA EAYNMTVMTT
RMFTHTGPRR GDVFAESTFA KQIAMIERGL IPPVVKTGNL DSLRTFADVR DAVRAYYMLV
TINPIPGAYY NIGGTYSCTV GQMLDTLISM STSKDVIRVE TDPERLRPID ADLQVPNTRK
FEAVTGWKPE ISFEKTMEDL LNYWRARISA GEKFLTR