Gene BURPS1710b_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3288 
SymbolwcbP 
ID3688998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3597258 
End bp3598046 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID637729743 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionYP_334659 
Protein GI76809473 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACA GTGCCGGGCC GCGGCATATC GCGATCACGG GCGCGAGCGC CGGCCTCGGG 
CGCGCGCTGG CCCGGGCGTA CGCGCGGCCC GGGGTGGTGC TGAGCCTCGG CGGACGCGAC
GCGGTGCGCC TCGAGGAAAG CGCCGCCGAT TGTCGTGCCC GCGGCGCCAC GGTTTTCGTC
GCGAGCATTG ACGTCCGCGA CGCCGATGCG ATGCGGCGGT GGCTCGAACA GTTCGACGAC
GCGCACCCGA TCCACCTGCT GATCGCCAAT GCCGGCGTGG CCAGTACGCT CGCGCACGGC
GGCGACTGGG AGGCGCGCGA GCGCACCGCG GCAATCGTCG ATACGAATTT CTACGGCGCG
ATGAATGCCG TACTGCCGGT CATCGATCGG ATGCGCGCGC GCGGTAGCGG GCAGGTCGCG
CTGATCAGCT CGCTCGCGGC GCTGCGAGGC ATGGCGATTT CACCCGCCTA TTGCGCGAGC
AAGGCGGCGT TGAAGGCATG GGGCGACTCG GTGCGTCCCG TGCTCAAACG CGACGGTATT
CGCCTGTCCG TCGTTTTGCC GGGGTTCGTC AAGACGGCGA TGAGCGATGT GTTCCCCGCA
GACAAGCCTC TGCTCTGGTC GCCCGACAAG GCTGCGCAGT ACATACAGCG CGGGATCGCC
GCCCGGCGCG CTGAAATTGC GTTCCCCGCT CTGCTCGCGC TCGGCATGCG GCTGCTCCCG
CTGTTGCCCG CGGTGATGGC GGATGCGATC CTCGGTCGAT TGTCCTATTT GCCGCGCGAG
GAGCGATAG
 
Protein sequence
MSDSAGPRHI AITGASAGLG RALARAYARP GVVLSLGGRD AVRLEESAAD CRARGATVFV 
ASIDVRDADA MRRWLEQFDD AHPIHLLIAN AGVASTLAHG GDWEARERTA AIVDTNFYGA
MNAVLPVIDR MRARGSGQVA LISSLAALRG MAISPAYCAS KAALKAWGDS VRPVLKRDGI
RLSVVLPGFV KTAMSDVFPA DKPLLWSPDK AAQYIQRGIA ARRAEIAFPA LLALGMRLLP
LLPAVMADAI LGRLSYLPRE ER