Gene BURPS1710b_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3263 
Symbol 
ID3691788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3567478 
End bp3568029 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content70% 
IMG OID637729718 
Product3-deoxy-manno-octulosonate-8-phosphatase 
Protein accessionYP_334634 
Protein GI76810805 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC CGGCGTATCG CGGCGCGATT CGGCTCGTGC TGTTCGACGT CGACGGCGTG 
CTGACCGACG GGCGGCTGCA TGTGACGGGC GACGGAGAGT GCATGAAGAG CTTCCATGCG
AAGGACGGCA TCGCCGTTGC GCTGCTGCAC GCGCACGGCA TTCGCAGCGG CATTCTGTCG
GGCCGCCACA GCGAGGCGCT CGCATGGCGC GCGCGGCAGC TCGGTTTCGA CGTGTGCGTG
TCGGGCTGCG GCGACAAGCG CGCCGGCTAC GCGCGCATCA AGTCCGAACA GGCGCTCGCG
GACCATGCGA TCGCGTATGT CGGCGACGAC GTCAACGATC TGCCCGTGAT CGACGCGGTC
GGCGTCTCGT ATGCGCCCGC CGACGCGCAC GTGCTCGTCA GGCGGCGCGT CGACTACGTC
GTCTCGCGCG CGGGCGGCGA GGGCGCCGCG CGGGAGGTCG CCGAGCACGT GCTGTTGCGC
TCGGGGTTGT CGCTCGACGA CGCATATCGG CCGTTGCTCG ACGAATGGGC TCGGCATGCC
GTCGTCCAAT GA
 
Protein sequence
MSAPAYRGAI RLVLFDVDGV LTDGRLHVTG DGECMKSFHA KDGIAVALLH AHGIRSGILS 
GRHSEALAWR ARQLGFDVCV SGCGDKRAGY ARIKSEQALA DHAIAYVGDD VNDLPVIDAV
GVSYAPADAH VLVRRRVDYV VSRAGGEGAA REVAEHVLLR SGLSLDDAYR PLLDEWARHA
VVQ