| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3246 |
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| Symbol | fimT |
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| ID | 3691771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3554285 |
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| End bp | 3554845 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637729701 |
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| Product | hypothetical protein |
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| Protein accession | YP_334618 |
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| Protein GI | 76811295 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGCGG AGCGTGACAG GTGGGCAACG GCGGGCTTCG TGCTCGTCGA AGTGATGGCT
GCGCTGATGC TCGTGGCGCT TGCCGCGATG CTGACCGCGC CGACGCTCGC CGGCGCTCGA
ATGCGCGATC GAGTGGACGC GCGGGCGCGC GTGTTCGGCG CATTGCTCGC CTATGCGCGC
GGCGAAGCGG TCAGGCTCGG CGCGCGCGTG GTGCTGTGCC GCAGCGATGC GACCGCGAAA
TGCATTGCGG CGGGGCGGCC ATGCGGTGGC GGGGCGGCCG ATTGGTCGTG CGGCTGGGCC
GTCGTCGCCG CGGATGGCGA ACGCGGTACG CGCCTGTTGC GGCGCATTGC GCCCGATGCC
CGAGTGGCCG TGACGGGCGC GACTGTCGAT GTCGTGTTCA CGCCGCCCGC GGGCCAGGTG
ATCGGCGGCT TCCGAAGTTT CGAGTTTGCG CCGGCAGACG CATCGGGCGC ATGGCGCGGG
GAACGCTGGC GCCGCTGCCT GCGCATCGCG GCGGGTGGTC GCGTGCGATT CGCCGAGGGC
GGTTGCGGAG CGTCGACATG A
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| Protein sequence | MRAERDRWAT AGFVLVEVMA ALMLVALAAM LTAPTLAGAR MRDRVDARAR VFGALLAYAR
GEAVRLGARV VLCRSDATAK CIAAGRPCGG GAADWSCGWA VVAADGERGT RLLRRIAPDA
RVAVTGATVD VVFTPPAGQV IGGFRSFEFA PADASGAWRG ERWRRCLRIA AGGRVRFAEG
GCGAST
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