| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3228 |
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| Symbol | hmgA |
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| ID | 3688297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3539426 |
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| End bp | 3540778 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637729683 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_334600 |
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| Protein GI | 76808659 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGAA CGACAATCAT GACATTGGAT TTTTCGAAAC CGGGCGAAGC CGGCTATCAG
AGCGGCTTCG CGAACGAATT CGCGACCGAG GCGCTGCCGG GCGCGTTGCC GCACGCGCGC
AACTCGCCGC AGCGCGCGCC GTACGGGCTC TACGCGGAGC AGTTCTCCGG CACCGCGTTC
ACCGCGCCGC GCGGCCACAA CCGCCGCTCG TGGCTGTACC GGATCCGGCC CGCCGCCGTG
CATCGGCCGT TCGAGCTCGT GTCGGGCGAG CGCCGGATCG TCGCCGAGTT CGGCGATTCG
GACGACGTGC CGCCGACGCC GCCGAACCAG TTGCGCTGGG ATCCGCTGCC GATGCCCGCG
CAGCCGACCG ATTTCGTCGA CGGCTGGGTG ACGATGGCGG GCAACGGCTC GGCCGCCGCG
ATGAGCGGCT GCGCGATCCA CCTGTACGCG GCGAACCGCT CGATGCGCGA GCGCTTCTTC
TACAGCGCGG ACGGCGAGCT GCTGATCGTG CCGCAGGAAG GGCGCCTCTT CATCATGACG
GAGCTCGGCC GGCTCGACGT CGAGCCGTTC GAGATCGCGG TGATCCCGCG CGGCGTGCGC
TTCGCGGTCG CGCTGCCGGA CGGGCGCGCG CGCGGCTATG TATGCGAGAA CTTCGGTGCG
CTGCTCAGGC TGCCGGACCT CGGGCCGATC GGCTCGAACG GCCTCGCGAA TCCGCGCGAC
TTCCTCACGC CGCACGCGTC GTACGAGGAT CGCGAAGGCG CGTTCGAGCT CGTCGCGAAG
CTGAATGGCC GGCTCTGGCG CGCGGACATC GATCATTCGC CGTTCGACGT CGTCGCGTGG
CACGGCAACT ACGCGCCGTA CAAGTACGAC CTGCGTCACT TCAACACGAT CGGCTCGATC
AGCTACGATC ATCCGGACCC GTCGATCTTC CTCGTGCTGC AGTCGCAAAG CGATACGCCG
GGCGTCGACG CGATCGACTT CGTGATCTTC CCCCCGCGCT GGCTCGCGGC CGAGGATACG
TTCCGCCCGC CTTGGTTCCA CCGCAACGTC GCGAGCGAAT TCATGGGGCT CGTGCACGGC
GTCTACGACG CGAAGGCCGA AGGCTTCGTG CCGGGCGGCG CGAGCCTGCA CAACTGCATG
TCCGGCCACG GGCCCGACGC GGACACGTTC GAGAAGGCTT CTTCGATCGA CACGTCGAAG
CCGAACAAGG TCGGCGACAC GATGGCGTTC ATGTTCGAGA CCCGCACGCT GATCCGGCCG
ACGCGCTTCG CGCTCGACAC CGCGCAACTG CAGGCGAACT ACTTCGAATG CTGGCAAGGC
CTCAAGAAAC ACTTCAATCC GGAGCAACGA TGA
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| Protein sequence | MERTTIMTLD FSKPGEAGYQ SGFANEFATE ALPGALPHAR NSPQRAPYGL YAEQFSGTAF
TAPRGHNRRS WLYRIRPAAV HRPFELVSGE RRIVAEFGDS DDVPPTPPNQ LRWDPLPMPA
QPTDFVDGWV TMAGNGSAAA MSGCAIHLYA ANRSMRERFF YSADGELLIV PQEGRLFIMT
ELGRLDVEPF EIAVIPRGVR FAVALPDGRA RGYVCENFGA LLRLPDLGPI GSNGLANPRD
FLTPHASYED REGAFELVAK LNGRLWRADI DHSPFDVVAW HGNYAPYKYD LRHFNTIGSI
SYDHPDPSIF LVLQSQSDTP GVDAIDFVIF PPRWLAAEDT FRPPWFHRNV ASEFMGLVHG
VYDAKAEGFV PGGASLHNCM SGHGPDADTF EKASSIDTSK PNKVGDTMAF MFETRTLIRP
TRFALDTAQL QANYFECWQG LKKHFNPEQR
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